6kx9

X-ray diffraction
2.9Å resolution

Crystal structure of 8-mer peptide from avian influenza H5N1 virus in complex with BF2*1501

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-149328 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Ig-like domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 272 amino acids
Theoretical weight: 30.93 KDa
Source organism: Gallus gallus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9GIP6 (Residues: 22-291; Coverage: 81%)
Gene name: BF2
Sequence domains:
Beta-2-microglobulin Chain: B
Molecule details ›
Chain: B
Length: 100 amino acids
Theoretical weight: 11.34 KDa
Source organism: Gallus gallus
Expression system: Escherichia coli
UniProt:
  • Canonical: P21611 (Residues: 22-119; Coverage: 100%)
Gene name: B2M
Sequence domains: Immunoglobulin C1-set domain
8-pepide (ARG-ARG-ALA-LEU-ARG-GLU-GLY-TYR) Chain: C
Molecule details ›
Chain: C
Length: 8 amino acids
Theoretical weight: 1.02 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U1
Spacegroup: P3121
Unit cell:
a: 124.195Å b: 124.195Å c: 80.57Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.193 0.193 0.246
Expression systems:
  • Escherichia coli
  • Not provided