› 6jzm

X-ray diffraction
1.88Å resolution

The intermediate forming O-C10 bond formation in AsqJ-catalyzed epoxidation

Released:
DOI: 10.2210/pdb6jzm/pdb
PDB entry 6jzm coloured by chain, front view.
PDB entry 6jzm coloured by chain, side view.
PDB entry 6jzm coloured by chain, top view.
Source organism: Aspergillus nidulans FGSC A4
Primary publication:
The intermediate forming O-C10 bond formation in AsqJ-catalyzed epoxidation
Liao HJ, Chan NL
J. Am. Chem. Soc. (2020)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-176882 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Iron/alpha-ketoglutarate-dependent dioxygenase asqJ Chain: B
Molecule details ›
Chain: B
Length: 308 amino acids
Theoretical weight: 34.02 KDa
Source organism: Aspergillus nidulans FGSC A4
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5AR53 (Residues: 109-416; Coverage: 74%)
Gene names: AN9227, asqJ
Sequence domains: Phytanoyl-CoA dioxygenase (PhyH)

Ligands and Environments

3 bound ligands:
Ligand FE 1 x FE
Ligand SIN 1 x SIN
Ligand CQ9 1 x CQ9
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSRRC BEAMLINE BL15A1
Spacegroup: C2221
Unit cell:
a: 74.147Å b: 121.805Å c: 66.617Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.175 0.171 0.214
Expression system: Escherichia coli

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