› 5zw5

X-ray diffraction
2.4Å resolution

Structure of SeMet-spAimR

Released:
DOI: 10.2210/pdb5zw5/pdb
PDB entry 5zw5 coloured by chain, front view.
PDB entry 5zw5 coloured by chain, side view.
PDB entry 5zw5 coloured by chain, top view.
Source organism: Bacillus virus SPbeta
Primary publication:
Structural and functional insights into the regulation of the lysis-lysogeny decision in viral communities.
Dou C, Xiong J, Gu Y, Yin K, Wang J, Hu Y, Zhou D, Fu X, Qi S, Zhu X, Yao S, Xu H, Nie C, Liang Z, Yang S, Wei Y, Cheng W
Nat Microbiol 3 1285-1294 (2018)
PMID: 30323253

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130264 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
AimR transcriptional regulator Chains: A, B
Molecule details ›
Chains: A, B
Length: 390 amino acids
Theoretical weight: 45.85 KDa
Source organism: Bacillus virus SPbeta
Expression system: Escherichia coli K-12
UniProt:
  • Canonical: O64094 (Residues: 1-386; Coverage: 100%)
Gene names: aimR, yopK

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL19U1
Spacegroup: P212121
Unit cell:
a: 33.275Å b: 124.71Å c: 207.063Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.224 0.222 0.248
Expression system: Escherichia coli K-12

Quick links

Citations

7 review citations

The arms race between bacteria and their phage foes.
Hampton et al. (2020)
6 more

1 mention without citation

Insights into the mechanism of action of the arbitrium communication system in SPbeta phages.
Gallego Del Sol et al. (2022)