5yis

X-ray diffraction
2.2Å resolution

Crystal Structure of AnkB LIR/LC3B complex

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-169572 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Microtubule-associated proteins 1A/1B light chain 3B Chains: A, B
Molecule details ›
Chains: A, B
Length: 125 amino acids
Theoretical weight: 14.64 KDa
Source organism: Mus musculus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9CQV6 (Residues: 1-125; Coverage: 100%)
Gene names: Map1alc3, Map1lc3, Map1lc3b
Sequence domains: Autophagy protein Atg8 ubiquitin like
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1
Ankyrin-2 Chains: C, D
Molecule details ›
Chains: C, D
Length: 27 amino acids
Theoretical weight: 3.24 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q01484 (Residues: 1588-1614; Coverage: 1%)
Gene names: ANK2, ANKB

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U1
Spacegroup: P212121
Unit cell:
a: 61.802Å b: 66.866Å c: 74.148Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.2 0.197 0.25
Expression system: Escherichia coli