5vjz

Hybrid

Joint X-ray/neutron structure of aspartate aminotransferase with alpha-methyl-aspartate at pH 7.5

Released:

Function and Biology Details

Reactions catalysed:
L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate
L-cysteine + 2-oxoglutarate = 2-oxo-3-sulfanylpropanoate + L-glutamate
Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-132569 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Aspartate aminotransferase, cytoplasmic Chain: A
Molecule details ›
Chain: A
Length: 412 amino acids
Theoretical weight: 46.39 KDa
Source organism: Sus scrofa
Expression system: Escherichia coli
UniProt:
  • Canonical: P00503 (Residues: 2-413; Coverage: 100%)
Gene name: GOT1
Sequence domains: Aminotransferase class I and II
Structure domains: Type I PLP-dependent aspartate aminotransferase-like (Major domain)
Aspartate aminotransferase, cytoplasmic Chain: B
Molecule details ›
Chain: B
Length: 412 amino acids
Theoretical weight: 46.62 KDa
Source organism: Sus scrofa
Expression system: Escherichia coli
UniProt:
  • Canonical: P00503 (Residues: 2-413; Coverage: 100%)
Gene name: GOT1
Sequence domains: Aminotransferase class I and II
Structure domains: Type I PLP-dependent aspartate aminotransferase-like (Major domain)

Ligands and Environments

2 bound ligands:
1 modified residue:

Experiments and Validation Details

Experimental Method: Neutron Diffraction, X-ray diffraction
Spacegroup: P212121
Unit cell:
a: 55.532Å b: 124.986Å c: 130.444Å α: 90° β: 90° γ: 90°
R-values:
R R work R free 0.197 0.234 0.221
Expression system: Escherichia coli