› 5qud

X-ray diffraction
1.3Å resolution

HumRadA1.2 soaked with napht-2,3-diol for 5 minutes at 20 mM

Released:
DOI: 10.2210/pdb5qud/pdb
PDB entry 5qud coloured by chain, front view.
PDB entry 5qud coloured by chain, side view.
PDB entry 5qud coloured by chain, top view.
Source organism: Pyrococcus furiosus
Entry authors: Marsh M, Hyvonen M

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130756 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DNA repair and recombination protein RadA Chain: A
Molecule details ›
Chain: A
Length: 229 amino acids
Theoretical weight: 25.29 KDa
Source organism: Pyrococcus furiosus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O74036 (Residues: 108-349; Coverage: 65%)
Gene names: PF1926, radA
Sequence domains: Rad51

Ligands and Environments

2 bound ligands:
Ligand D48 1 x D48
Ligand PO4 1 x PO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X06DA
Spacegroup: P21212
Unit cell:
a: 68.988Å b: 72.852Å c: 40.314Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.166 0.164 0.193
Expression system: Escherichia coli BL21(DE3)

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