› 4yto

X-ray diffraction
2Å resolution

Structure of coiled-coil domain of SYCP1

Released:
DOI: 10.2210/pdb4yto/pdb
PDB entry 4yto coloured by chain, front view.
PDB entry 4yto coloured by chain, side view.
PDB entry 4yto coloured by chain, top view.
Source organism: Homo sapiens
Entry author: park HH

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-172285 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Synaptonemal complex protein 1 Chains: A, B
Molecule details ›
Chains: A, B
Length: 148 amino acids
Theoretical weight: 17.65 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q15431 (Residues: 662-801; Coverage: 14%)
Gene names: SCP1, SYCP1

Ligands and Environments

1 bound ligand:
Ligand GOL 2 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PAL/PLS BEAMLINE 5C (4A)
Spacegroup: P41212
Unit cell:
a: 119.606Å b: 119.606Å c: 83.572Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.232 0.231 0.256
Expression system: Escherichia coli

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