› 4mm7

X-ray diffraction
2.85Å resolution

Crystal structure of LeuBAT (delta13 mutant) in complex with desvenlafaxine

Released:
DOI: 10.2210/pdb4mm7/pdb
PDB entry 4mm7 coloured by chain, front view.
PDB entry 4mm7 coloured by chain, side view.
PDB entry 4mm7 coloured by chain, top view.
Source organism: Aquifex aeolicus VF5
Primary publication:
Structural basis for action by diverse antidepressants on biogenic amine transporters.
Wang H, Goehring A, Wang KH, Penmatsa A, Ressler R, Gouaux E
Nature 503 141-5 (2013)
PMID: 24121440

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130575 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Na(+):neurotransmitter symporter (Snf family) Chain: A
Molecule details ›
Chain: A
Length: 519 amino acids
Theoretical weight: 57.99 KDa
Source organism: Aquifex aeolicus VF5
Expression system: Escherichia coli
UniProt:
  • Canonical: O67854 (Residues: 1-513; Coverage: 100%)
Gene names: aq_2077, snf
Sequence domains: Sodium:neurotransmitter symporter family

Ligands and Environments

2 bound ligands:
Ligand NA 2 x NA
Ligand 29J 1 x 29J
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-E
Spacegroup: C2
Unit cell:
a: 87.593Å b: 88.016Å c: 81.447Å
α: 90° β: 95.04° γ: 90°
R-values:
R R work R free
0.212 0.21 0.252
Expression system: Escherichia coli

Quick links

Citations

17 review citations

Behavioral, biological, and chemical perspectives on atypical agents targeting the dopamine transporter.
Reith et al. (2015)
16 more

1 mention without citation

Structural basis for action by diverse antidepressants on biogenic amine transporters.
Wang et al. (2013)