4m4y

X-ray diffraction
2.2Å resolution

Crystal structure of a 2009 H1N1 influenza virus hemagglutinin with a stabilization mutation HA2 E47G

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-111242 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (4 distinct):
Hemagglutinin Chains: A, C, E
Molecule details ›
Chains: A, C, E
Length: 331 amino acids
Theoretical weight: 36.73 KDa
Source organism: Influenza A virus (A/California/04/2009(H1N1))
Expression system: Trichoplusia ni
UniProt:
  • Canonical: C3W5S1 (Residues: 18-344; Coverage: 58%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains:
Hemagglutinin HA2 chain Chains: B, D, F
Molecule details ›
Chains: B, D, F
Length: 177 amino acids
Theoretical weight: 20.21 KDa
Source organism: Influenza A virus (A/California/04/2009(H1N1))
Expression system: Trichoplusia ni
UniProt:
  • Canonical: C3W5S1 (Residues: 345-518; Coverage: 31%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, FUL
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL12-2
Spacegroup: P212121
Unit cell:
a: 71.367Å b: 132.174Å c: 201.809Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.182 0.179 0.232
Expression system: Trichoplusia ni