› 4hyz

X-ray diffraction
2.25Å resolution

Crystal structure of a DUF3887 family protein (RUMGNA_01855) from Ruminococcus gnavus ATCC 29149 at 2.25 A resolution

Released:
DOI: 10.2210/pdb4hyz/pdb
PDB entry 4hyz coloured by chain, front view.
PDB entry 4hyz coloured by chain, side view.
PDB entry 4hyz coloured by chain, top view.
Source organism: [Ruminococcus] gnavus ATCC 29149
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-108231 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF3887 domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 114 amino acids
Theoretical weight: 13.42 KDa
Source organism: [Ruminococcus] gnavus ATCC 29149
Expression system: Escherichia coli
UniProt:
  • Canonical: A7B2S7 (Residues: 37-149; Coverage: 90%)
Gene name: RUMGNA_01855
Sequence domains: Protein of unknown function (DUF3887)
Structure domains: Nuclear Transport Factor 2; Chain: A,

Ligands and Environments

3 bound ligands:
Ligand SO4 6 x SO4
Ligand CL 6 x CL
Ligand GOL 8 x GOL
1 modified residue:
Ligand MSE 6 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P6522
Unit cell:
a: 66.29Å b: 66.29Å c: 253.83Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.188 0.186 0.208
Expression system: Escherichia coli

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