› 4hob

X-ray diffraction
1.76Å resolution

The crystal structure of the Zalpha domain from Cyprinid Herpes virus 3

Released:
DOI: 10.2210/pdb4hob/pdb
PDB entry 4hob coloured by chain, front view.
PDB entry 4hob coloured by chain, side view.
PDB entry 4hob coloured by chain, top view.
Source organism: Cyprinid herpesvirus 3
Primary publication:
Crystal structure of a poxvirus-like zalpha domain from cyprinid herpesvirus 3.
Tomé AR, Kuś K, Correia S, Paulo LM, Zacarias S, de Rosa M, Figueiredo D, Parkhouse RM, Athanasiadis A
J Virol 87 3998-4004 (2013)
PMID: 23365431

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107280 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative uncharacterized protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 69 amino acids
Theoretical weight: 7.78 KDa
Source organism: Cyprinid herpesvirus 3
Expression system: Escherichia coli
UniProt:
  • Canonical: A4FTK7 (Residues: 216-278; Coverage: 23%)
Gene name: KHVJ122
Sequence domains: Adenosine deaminase z-alpha domain
Structure domains: Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain

Ligands and Environments

1 bound ligand:
Ligand SO4 9 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID23-1
Spacegroup: P212121
Unit cell:
a: 51.736Å b: 54.584Å c: 86.642Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.204 0.201 0.247
Expression system: Escherichia coli

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Citations

7 review citations

Cyprinid herpesvirus 3: an interesting virus for applied and fundamental research.
Rakus et al. (2013)
6 more

4 mentions without citation

Crystal structure of a poxvirus-like zalpha domain from cyprinid herpesvirus 3.
Tomé et al. (2013)
3 more