› 4gdo

X-ray diffraction
1.7Å resolution

Structure of a fragment of the rod domain of plectin

Released:
DOI: 10.2210/pdb4gdo/pdb
PDB entry 4gdo coloured by chain, front view.
PDB entry 4gdo coloured by chain, side view.
PDB entry 4gdo coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Exploiting tertiary structure through local folds for crystallographic phasing.
Sammito M, Millán C, Rodríguez DD, de Ilarduya IM, Meindl K, De Marino I, Petrillo G, Buey RM, de Pereda JM, Zeth K, Sheldrick GM, Usón I
Nat Methods 10 1099-101 (2013)
PMID: 24037245

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-172227 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Plectin Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 43 amino acids
Theoretical weight: 4.88 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q15149 (Residues: 1492-1530; Coverage: 1%)
Gene names: PLEC, PLEC1
Structure domains: Single Helix bin

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BRUKER AXS MICROSTAR-H
Spacegroup: C2
Unit cell:
a: 90.62Å b: 35.87Å c: 75.69Å
α: 90° β: 94.11° γ: 90°
R-values:
R R work R free
0.215 0.213 0.248
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

1 review citation

Applications of contact predictions to structural biology.
Simkovic et al. (2017)
29 other articles

2 mentions without citation

Macromolecular ab initio phasing enforcing secondary and tertiary structure.
Millán et al. (2015)
1 more