› 3onj

X-ray diffraction
1.92Å resolution

Crystal structure of yeast Vti1p_Habc domain

Released:
DOI: 10.2210/pdb3onj/pdb
PDB entry 3onj coloured by chain, front view.
PDB entry 3onj coloured by chain, side view.
PDB entry 3onj coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
Epsin N-terminal homology domains bind on opposite sides of two SNAREs.
Wang J, Gossing M, Fang P, Zimmermann J, Li X, von Mollard GF, Niu L, Teng M
Proc Natl Acad Sci U S A 108 12277-82 (2011)
PMID: 21746902

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170019 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
t-SNARE VTI1 Chain: A
Molecule details ›
Chain: A
Length: 97 amino acids
Theoretical weight: 11 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q04338 (Residues: 3-99; Coverage: 45%)
Gene names: VTI1, YM9646.10C, YMR197C
Sequence domains: Vesicle transport v-SNARE protein N-terminus
Structure domains: t-snare proteins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: P212121
Unit cell:
a: 32.112Å b: 49.751Å c: 51.69Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.179 0.172 0.24
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

2 review citations

Protein sorting at the trans-Golgi network.
Guo et al. (2014)
1 more

4 mentions without citation

Epsin N-terminal homology domains bind on opposite sides of two SNAREs.
Wang et al. (2011)
3 more