› 3b3d

X-ray diffraction
2.3Å resolution

B.subtilis YtbE

Released:
DOI: 10.2210/pdb3b3d/pdb
PDB entry 3b3d coloured by chain, front view.
PDB entry 3b3d coloured by chain, side view.
PDB entry 3b3d coloured by chain, top view.
Source organism: Bacillus subtilis
Primary publication:
Structural and biochemical analyses of YvgN and YtbE from Bacillus subtilis.
Lei J, Zhou YF, Li LF, Su XD
Protein Sci 18 1792-800 (2009)
PMID: 19585557

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-128578 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Uncharacterized oxidoreductase YtbE Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 314 amino acids
Theoretical weight: 35.36 KDa
Source organism: Bacillus subtilis
Expression system: Escherichia coli
UniProt:
  • Canonical: O34678 (Residues: 1-280; Coverage: 100%)
Gene names: BSU29050, ytbE
Sequence domains: Aldo/keto reductase family
Structure domains: NADP-dependent oxidoreductase domain

Ligands and Environments

1 bound ligand:
Ligand CA 4 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BSRF BEAMLINE 3W1A
Spacegroup: P212121
Unit cell:
a: 83.106Å b: 89.17Å c: 115.687Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.196 0.192 0.26
Expression system: Escherichia coli

Quick links

Citations

3 review citations

YqhD: a broad-substrate range aldehyde reductase with various applications in production of biorenewable fuels and chemicals.
Jarboe LR. (2011)
2 more

3 mentions without citation

The Blueprint of a Minimal Cell: MiniBacillus.
Reuß et al. (2016)
2 more