› 3oq0

X-ray diffraction
2.7Å resolution

Crystal Structure of motif N of Saccharomyces cerevisiae Dbf4

Released:
DOI: 10.2210/pdb3oq0/pdb
PDB entry 3oq0 coloured by chain, front view.
PDB entry 3oq0 coloured by chain, side view.
PDB entry 3oq0 coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
Crystal Structure of Saccharomyces cerevisiae Dbf4-motif N
Matthews LA, Jones DR, Prasad AA, Duncker BP, Guarne A
To be published

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-152263 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DDK kinase regulatory subunit DBF4 Chains: A, B, C, D, E, F, G, H, I, J
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J
Length: 151 amino acids
Theoretical weight: 17.75 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P32325 (Residues: 120-250; Coverage: 19%)
Gene names: D4205, DBF4, DNA52, YD9609.07C, YDR052C
Sequence domains: Dfp1/Him1, central region
Structure domains: BRCT domain

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 50 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P21
Unit cell:
a: 90.221Å b: 79.358Å c: 127.419Å
α: 90° β: 110.74° γ: 90°
R-values:
R R work R free
0.207 0.205 0.244
Expression system: Escherichia coli BL21(DE3)

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