3ntw

X-ray diffraction
2.6Å resolution

Structure of the MLLE domain of EDD in complex with a PAM2 peptide from Paip1

Released:

Function and Biology Details

Reaction catalysed:
(1a) S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [HECT-type E3 ubiquitin transferase]-L-cysteine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + S-ubiquitinyl-[HECT-type E3 ubiquitin transferase]-L-cysteine
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-178958 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
E3 ubiquitin-protein ligase UBR5 Chains: A, C
Molecule details ›
Chains: A, C
Length: 65 amino acids
Theoretical weight: 7.1 KDa
Source organism: Rattus norvegicus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q62671 (Residues: 2383-2442; Coverage: 2%)
Gene names: Dd5, Edd, Edd1, Hyd, Ubr5
Sequence domains: Poly-adenylate binding protein, unique domain
Structure domains: c-terminal domain of poly(a) binding protein
Polyadenylate-binding protein-interacting protein 1 Chains: B, D
Molecule details ›
Chains: B, D
Length: 22 amino acids
Theoretical weight: 2.43 KDa
Source organism: Homo sapiens
Expression system: Not provided
UniProt:
  • Canonical: Q9H074 (Residues: 123-144; Coverage: 5%)
Gene name: PAIP1
Sequence domains: Ataxin-2 C-terminal region

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CHESS BEAMLINE A1
Spacegroup: P6422
Unit cell:
a: 95.794Å b: 95.794Å c: 82.936Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.228 0.227 0.29
Expression systems:
  • Escherichia coli
  • Not provided