› 3dze

X-ray diffraction
1.15Å resolution

Crystal structure of bovine coupling Factor B bound with cadmium

Released:
DOI: 10.2210/pdb3dze/pdb
PDB entry 3dze coloured by chain, front view.
PDB entry 3dze coloured by chain, side view.
PDB entry 3dze coloured by chain, top view.
Source organism: Bos taurus
Primary publication:
Crystal structure of bovine mitochondrial factor B at 0.96-A resolution.
Lee JK, Belogrudov GI, Stroud RM
Proc Natl Acad Sci U S A 105 13379-84 (2008)
PMID: 18768789

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-149504 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
ATP synthase subunit s, mitochondrial Chain: A
Molecule details ›
Chain: A
Length: 176 amino acids
Theoretical weight: 20.51 KDa
Source organism: Bos taurus
Expression system: Escherichia coli
UniProt:
  • Canonical: P22027 (Residues: 26-200; Coverage: 88%)
Gene names: ATP5S, ATPW, DMAC2L
Structure domains: Ribonuclease Inhibitor

Ligands and Environments

3 bound ligands:
Ligand TRS 1 x TRS
Ligand CD 1 x CD
Ligand MG 1 x MG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.3.1
Spacegroup: C2
Unit cell:
a: 108.01Å b: 49.924Å c: 36.942Å
α: 90° β: 109.58° γ: 90°
R-values:
R R work R free
0.13 0.129 0.155
Expression system: Escherichia coli

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Citations

5 review citations

The Mitochondrial Permeability Transition Pore: Channel Formation by F-ATP Synthase, Integration in Signal Transduction, and Role in Pathophysiology.
Bernardi et al. (2015)
4 more

2 mentions without citation

Crystal structure of the dimer of two essential Salmonella typhimurium proteins, YgjD & YeaZ and calorimetric evidence for the formation of a ternary YgjD-YeaZ-YjeE complex.
Nichols et al. (2013)
1 more