› 3cdd

X-ray diffraction
2.1Å resolution

Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis

Released:
DOI: 10.2210/pdb3cdd/pdb
PDB entry 3cdd coloured by chain, front view.
PDB entry 3cdd coloured by chain, side view.
PDB entry 3cdd coloured by chain, top view.
Source organism: Shewanella oneidensis MR-1
Entry authors: Chang C, Evdokimova E, Kudritska M, Savchenko A, Edwards AM, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-184357 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Baseplate hub protein gp44-like N-terminal domain-containing protein Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 361 amino acids
Theoretical weight: 39.8 KDa
Source organism: Shewanella oneidensis MR-1
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q8EDP4 (Residues: 2-359; Coverage: 100%)
Gene names: SO_2699, gpP
Sequence domains: Mu phage baseplate assembly protein GpP-like, N-terminal
Structure domains:

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 36 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P21
Unit cell:
a: 96.345Å b: 82.445Å c: 151.832Å
α: 90° β: 100.2° γ: 90°
R-values:
R R work R free
0.204 0.201 0.257
Expression system: Escherichia coli BL21(DE3)

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