› 2vaj

X-ray diffraction
2.7Å resolution

Crystal structure of NCAM2 Ig1 (I4122 cell unit)

Released:
DOI: 10.2210/pdb2vaj/pdb
PDB entry 2vaj coloured by chain, front view.
PDB entry 2vaj coloured by chain, side view.
PDB entry 2vaj coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Crystal structure of the Ig1 domain of the neural cell adhesion molecule NCAM2 displays domain swapping.
Rasmussen KK, Kulahin N, Kristensen O, Poulsen JC, Sigurskjold BW, Kastrup JS, Berezin V, Bock E, Walmod PS, Gajhede M
J Mol Biol 382 1113-20 (2008)
PMID: 18706912

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-127468 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Neural cell adhesion molecule 2 Chain: A
Molecule details ›
Chain: A
Length: 93 amino acids
Theoretical weight: 10.36 KDa
Source organism: Homo sapiens
Expression system: Prochlorococcus marinus subsp. pastoris
UniProt:
  • Canonical: O15394 (Residues: 21-113; Coverage: 11%)
Gene names: NCAM2, NCAM21
Sequence domains: Immunoglobulin I-set domain
Structure domains: Immunoglobulins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: MAX II BEAMLINE I911-5
Spacegroup: I4122
Unit cell:
a: 47.279Å b: 47.279Å c: 196.727Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.229 0.227 0.268
Expression system: Prochlorococcus marinus subsp. pastoris

Quick links

Citations

1 review citation

Domain structure and function of matrix metalloprotease 23 (MMP23): role in potassium channel trafficking.
Galea et al. (2014)
3 other articles

3 mentions without citation

A secreted tyrosine kinase acts in the extracellular environment.
Bordoli et al. (2014)
2 more