› 2jkj

X-ray diffraction
2.3Å resolution

DraE Adhesin in complex with Chloramphenicol Succinate

Released:
DOI: 10.2210/pdb2jkj/pdb
PDB entry 2jkj coloured by chain, front view.
PDB entry 2jkj coloured by chain, side view.
PDB entry 2jkj coloured by chain, top view.
Source organism: Escherichia coli
Primary publication:
A structural study of the interaction between the Dr haemagglutinin DraE and derivatives of chloramphenicol.
Pettigrew DM, Roversi P, Davies SG, Russell AJ, Lea SM
Acta Crystallogr D Biol Crystallogr 65 513-22 (2009)
PMID: 19465765

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-150156 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Dr hemagglutinin structural subunit Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 149 amino acids
Theoretical weight: 16.17 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P24093 (Residues: 20-160; Coverage: 100%)
Gene name: draA
Sequence domains: Dr-family adhesin
Structure domains: Dr adhesin

Ligands and Environments

3 bound ligands:
Ligand SO4 15 x SO4
Ligand CLM 6 x CLM
Ligand TH8 2 x TH8
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BRUKER AXS MICROSTAR
Spacegroup: P3
Unit cell:
a: 119.6Å b: 119.6Å c: 57.7Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.25 0.249 0.278
Expression system: Escherichia coli

Quick links

Citations

2 review citations

Adhesive organelles of Gram-negative pathogens assembled with the classical chaperone/usher machinery: structure and function from a clinical standpoint.
Zav'yalov et al. (2010)
1 more

3 mentions without citation

The Effect of Recombinant Human Erythropoietin on Bacterial Growth: A Dual-Edged Sword.
Mittal et al. (2019)
2 more