› 1wh9

Solution NMR

Solution structure of the KH domain of human ribosomal protein S3

Released:
DOI: 10.2210/pdb1wh9/pdb
PDB entry 1wh9 coloured by chain, ensemble of 20 models, front view.
PDB entry 1wh9 coloured by chain, ensemble of 20 models, side view.
PDB entry 1wh9 coloured by chain, ensemble of 20 models, top view.
Source organism: Homo sapiens
Entry authors: Nameki N, Tomizawa T, Koshiba S, Kigawa T, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Reaction catalysed: 
The C-O-P bond 3' to the apurinic or apyrimidinic site in DNA is broken by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-149952 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Small ribosomal subunit protein uS3 Chain: A
Molecule details ›
Chain: A
Length: 92 amino acids
Theoretical weight: 9.92 KDa
Source organism: Homo sapiens
Expression system: Not provided
UniProt:
  • Canonical: P23396 (Residues: 17-95; Coverage: 33%)
Gene names: OK/SW-cl.26, RPS3
Sequence domains: KH domain
Structure domains: GMP Synthetase; Chain A, domain 3

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: torsion angle dynamics, restrained molecular dynamics
Expression system: Not provided

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