1flc

X-ray diffraction
3.2Å resolution

X-RAY STRUCTURE OF THE HAEMAGGLUTININ-ESTERASE-FUSION GLYCOPROTEIN OF INFLUENZA C VIRUS

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-139864 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (5 distinct):
Hemagglutinin-esterase-fusion glycoprotein chain 1 Chains: A, C, E
Molecule details ›
Chains: A, C, E
Length: 432 amino acids
Theoretical weight: 48.23 KDa
Source organism: Influenza C virus (C/Johannesburg/1/66)
Expression system: Not provided
UniProt:
  • Canonical: P07975 (Residues: 15-446; Coverage: 67%)
Gene name: HE
Sequence domains:
Structure domains: Ubiquitin Ligase Nedd4; Chain: W;
Hemagglutinin-esterase-fusion glycoprotein chain 2 Chains: B, D, F
Molecule details ›
Chains: B, D, F
Length: 175 amino acids
Theoretical weight: 18.98 KDa
Source organism: Influenza C virus (C/Johannesburg/1/66)
Expression system: Not provided
UniProt:
  • Canonical: P07975 (Residues: 447-621; Coverage: 27%)
Gene name: HE
Sequence domains: Influenza C hemagglutinin stalk
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG, NDG, MAN
Carbohydrate polymer : NEW Components: NAG, BMA, NDG
No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CHESS BEAMLINE F1
Spacegroup: P4322
Unit cell:
a: 155.4Å b: 155.4Å c: 414.4Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.223 0.223 0.267
Expression system: Not provided