Chemical Components in the PDB

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AGL : Summary

Code

AGL

One-letter code

X

Molecule name

4-amino-4,6-dideoxy-alpha-D-glucopyranose

Synonyms

4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE
4-amino-4-deoxy-alpha-D-quinovopyranose
4-amino-4,6-dideoxy-alpha-D-glucose
4-amino-4,6-dideoxy-D-glucose
4-amino-4,6-dideoxy-glucose

Systematic names

ProgramVersionName
ACDLabs 10.04 4-amino-4,6-dideoxy-alpha-D-glucopyranose
OpenEye OEToolkits 1.5.0 (2S,3R,4S,5S,6R)-5-amino-6-methyl-oxane-2,3,4-triol

Formula

C6 H13 N O4

Formal charge

0

Molecular weight

163.172 Da

SMILES

TypeProgramVersionDescriptor
SMILES ACDLabs 10.04 OC1C(N)C(OC(O)C1O)C
SMILES CACTVS 3.341 C[CH]1O[CH](O)[CH](O)[CH](O)[CH]1N
SMILES OpenEye OEToolkits 1.5.0 CC1C(C(C(C(O1)O)O)O)N
Canonical SMILES CACTVS 3.341 C[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1N
Canonical SMILES OpenEye OEToolkits 1.5.0 C[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)N

IUPAC InChI

InChI=1S/C6H13NO4/c1-2-3(7)4(8)5(9)6(10)11-2/h2-6,8-10H,7H2,1H3/t2-,3-,4+,5-,6+/m1/s1

IUPAC InChI key

RJKBJEZZABBYBA-DVKNGEFBSA-N
AGL

wwPDB Information

Atom count

24 (11 without Hydrogen)

Polymer type

Saccharide

Type description

D-saccharide, alpha linking

Type code

ATOMS

Is modified

No

Standard parent

Not Assigned

Defined at

1999-07-08

Last modified at

2020-07-17

Status

Released

Obsoleted

Not Assigned