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H4B : Summary
Code
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H4B
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One-letter code
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X
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Molecule name
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5,6,7,8-TETRAHYDROBIOPTERIN
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Systematic names
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Formula
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C9 H15 N5 O3
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Formal charge
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0
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Molecular weight
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241.247 Da
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SMILES
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Type | Program | Version | Descriptor |
SMILES
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ACDLabs |
10.04 |
O=C1C=2NC(CNC=2N=C(N1)N)C(O)C(O)C |
SMILES
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CACTVS |
3.341 |
C[CH](O)[CH](O)[CH]1CNC2=C(N1)C(=O)NC(=N2)N |
SMILES
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OpenEye OEToolkits |
1.5.0 |
CC(C(C1CNC2=C(N1)C(=O)NC(=N2)N)O)O |
Canonical SMILES
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CACTVS |
3.341 |
C[C@H](O)[C@H](O)[C@H]1CNC2=C(N1)C(=O)NC(=N2)N |
Canonical SMILES
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OpenEye OEToolkits |
1.5.0 |
C[C@@H]([C@@H]([C@H]1CNC2=C(N1)C(=O)NC(=N2)N)O)O |
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IUPAC InChI | InChI=1S/C9H15N5O3/c1-3(15)6(16)4-2-11-7-5(12-4)8(17)14-9(10)13-7/h3-4,6,12,15-16H,2H2,1H3,(H4,10,11,13,14,17)/t3-,4+,6-/m0/s1 |
IUPAC InChI key | FNKQXYHWGSIFBK-RPDRRWSUSA-N |
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wwPDB Information |
Atom count
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32 (17 without Hydrogen)
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Polymer type
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Bound ligand
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Type description
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NON-POLYMER
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Type code
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HETAIN
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Is modified
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No
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Standard parent
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Not Assigned
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Defined at
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1999-07-08
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Last modified at
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2011-06-04
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Status
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Released
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Obsoleted
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Not Assigned
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H4B : Atoms of Molecule
Total Number of Atoms: 32
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
N1 |
N |
N1 |
N |
Y |
N |
0 |
-1.207 |
0.564 |
-2.216 |
2 |
C2 |
C |
C2 |
N |
Y |
N |
0 |
-0.213 |
0.636 |
-3.075 |
3 |
N2 |
N |
N2 |
N |
N |
N |
0 |
-0.406 |
1.285 |
-4.269 |
4 |
N3 |
N |
N3 |
N |
Y |
N |
0 |
1.0 |
0.082 |
-2.809 |
5 |
C4 |
C |
C4 |
N |
Y |
N |
0 |
1.211 |
-0.562 |
-1.641 |
6 |
O4 |
O |
O4 |
N |
N |
N |
0 |
2.297 |
-1.064 |
-1.392 |
7 |
C4A |
C |
C4A |
N |
Y |
N |
0 |
0.158 |
-0.642 |
-0.723 |
8 |
N8 |
N |
N8 |
N |
N |
N |
0 |
-2.112 |
-0.125 |
-0.142 |
9 |
C8A |
C |
C8A |
N |
Y |
N |
0 |
-1.059 |
-0.059 |
-1.041 |
10 |
N5 |
N |
N5 |
N |
N |
N |
0 |
0.326 |
-1.306 |
0.512 |
11 |
C6 |
C |
C6 |
R |
N |
N |
0 |
-0.662 |
-1.066 |
1.575 |
12 |
C7 |
C |
C7 |
N |
N |
N |
0 |
-2.061 |
-1.113 |
0.944 |
13 |
C9 |
C |
C9 |
R |
N |
N |
0 |
-0.423 |
0.308 |
2.202 |
14 |
O9 |
O |
O9 |
N |
N |
N |
0 |
-1.396 |
0.542 |
3.223 |
15 |
C10 |
C |
C10 |
S |
N |
N |
0 |
0.978 |
0.353 |
2.814 |
16 |
C11 |
C |
C11 |
N |
N |
N |
0 |
1.217 |
1.728 |
3.441 |
17 |
O10 |
O |
O10 |
N |
N |
N |
0 |
1.951 |
0.119 |
1.793 |
18 |
HN21 |
H |
1HN2 |
N |
N |
N |
0 |
-1.267 |
1.683 |
-4.471 |
19 |
HN22 |
H |
2HN2 |
N |
N |
N |
0 |
0.318 |
1.345 |
-4.911 |
20 |
HN3 |
H |
HN3 |
N |
N |
N |
0 |
1.717 |
0.151 |
-3.46 |
21 |
HN5 |
H |
HN5 |
N |
N |
N |
0 |
1.074 |
-1.907 |
0.655 |
22 |
HN8 |
H |
HN8 |
N |
N |
N |
0 |
-2.872 |
0.471 |
-0.229 |
23 |
H6 |
H |
H6 |
N |
N |
N |
0 |
-0.576 |
-1.839 |
2.339 |
24 |
H71 |
H |
1H7 |
N |
N |
N |
0 |
-2.251 |
-2.109 |
0.545 |
25 |
H72 |
H |
2H7 |
N |
N |
N |
0 |
-2.811 |
-0.87 |
1.697 |
26 |
H9 |
H |
H9 |
N |
N |
N |
0 |
-0.509 |
1.077 |
1.435 |
27 |
HO9 |
H |
HO9 |
N |
N |
N |
0 |
-1.285 |
-0.158 |
3.88 |
28 |
H10 |
H |
H10 |
N |
N |
N |
0 |
1.065 |
-0.415 |
3.581 |
29 |
H111 |
H |
1H11 |
N |
N |
N |
0 |
2.216 |
1.76 |
3.876 |
30 |
H112 |
H |
2H11 |
N |
N |
N |
0 |
1.13 |
2.497 |
2.673 |
31 |
H113 |
H |
3H11 |
N |
N |
N |
0 |
0.475 |
1.906 |
4.219 |
32 |
HO0 |
H |
HO0 |
N |
N |
N |
0 |
1.84 |
0.82 |
1.136 |
H4B : Chemical Bonds
Total Number of Bonds: 33
H4B : Used in PDB Entries
Total Number of PDB Entries: 640
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