Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : ZIT    

Bonds between two atoms of the molecule

Total Number of Bonds: 126


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.51 N N
2 C1 O1 C O doub 1.22 N N
3 C1 O14 C O sing 1.34 N N
4 C2 C3 C C sing 1.53 N N
5 C2 C17 C C sing 1.53 N N
6 C2 H2 C H sing 1.09 N N
7 C3 C4 C C sing 1.52 N N
8 C3 O1B C O sing 1.43 N N
9 C3 H3 C H sing 1.11 N N
10 C4 C5 C C sing 1.53 N N
11 C4 C18 C C sing 1.54 N N
12 C4 H4 C H sing 1.09 N N
13 C5 C6 C C sing 1.53 N N
14 C5 O1A C O sing 1.43 N N
15 C5 H5 C H sing 1.1 N N
16 C6 C7 C C sing 1.52 N N
17 C6 C19 C C sing 1.52 N N
18 C6 O6 C O sing 1.45 N N
19 C7 C8 C C sing 1.53 N N
20 C7 H71 C H sing 1.11 N N
21 C7 H72 C H sing 1.1 N N
22 C8 C9 C C sing 1.51 N N
23 C8 C20 C C sing 1.52 N N
24 C8 H8 C H sing 1.13 N N
25 C9 N10 C N sing 1.49 N N
26 C9 H91 C H sing 1.06 N N
27 C9 H92 C H sing 1.13 N N
28 N10 C11 N C sing 1.51 N N
29 N10 C21 N C sing 1.5 N N
30 C11 C12 C C sing 1.51 N N
31 C11 C22 C C sing 1.54 N N
32 C11 H11 C H sing 1.1 N N
33 C12 C13 C C sing 1.54 N N
34 C12 O12 C O sing 1.45 N N
35 C12 H12 C H sing 1.09 N N
36 C13 C14 C C sing 1.54 N N
37 C13 C23 C C sing 1.53 N N
38 C13 O13 C O sing 1.44 N N
39 C14 C15 C C sing 1.54 N N
40 C14 O14 C O sing 1.45 N N
41 C14 H14 C H sing 1.09 N N
42 C15 C16 C C sing 1.53 N N
43 C15 H151 C H sing 1.09 N N
44 C15 H152 C H sing 1.09 N N
45 C16 H161 C H sing 1.09 N N
46 C16 H162 C H sing 1.09 N N
47 C16 H163 C H sing 1.09 N N
48 C17 H171 C H sing 1.09 N N
49 C17 H172 C H sing 1.09 N N
50 C17 H173 C H sing 1.09 N N
51 C18 H181 C H sing 1.09 N N
52 C18 H182 C H sing 1.09 N N
53 C18 H183 C H sing 1.09 N N
54 C19 H191 C H sing 1.09 N N
55 C19 H192 C H sing 1.09 N N
56 C19 H193 C H sing 1.09 N N
57 C20 H201 C H sing 1.09 N N
58 C20 H202 C H sing 1.09 N N
59 C20 H203 C H sing 1.09 N N
60 C21 H211 C H sing 1.09 N N
61 C21 H212 C H sing 1.09 N N
62 C21 H213 C H sing 1.09 N N
63 C22 H221 C H sing 1.09 N N
64 C22 H222 C H sing 1.09 N N
65 C22 H223 C H sing 1.09 N N
66 C23 H231 C H sing 1.09 N N
67 C23 H232 C H sing 1.09 N N
68 C23 H233 C H sing 1.09 N N
69 O6 HO6 O H sing 0.97 N N
70 O12 HO12 O H sing 0.97 N N
71 O13 HO13 O H sing 0.97 N N
72 C1A C2A C C sing 1.53 N N
73 C1A O1A C O sing 1.43 N N
74 C1A O5A C O sing 1.43 N N
75 C1A H1A1 C H sing 1.09 N N
76 C2A C3A C C sing 1.53 N N
77 C2A O2A C O sing 1.43 N N
78 C2A H2A1 C H sing 1.09 N N
79 C3A C4A C C sing 1.53 N N
80 C3A N3A C N sing 1.47 N N
81 C3A H3A1 C H sing 1.09 N N
82 C4A C5A C C sing 1.53 N N
83 C4A H4A1 C H sing 1.09 N N
84 C4A H4A2 C H sing 1.09 N N
85 C5A C6A C C sing 1.53 N N
86 C5A O5A C O sing 1.43 N N
87 C5A H5A1 C H sing 1.09 N N
88 C6A H6A1 C H sing 1.09 N N
89 C6A H6A2 C H sing 1.09 N N
90 C6A H6A3 C H sing 1.09 N N
91 C7A N3A C N sing 1.47 N N
92 C7A H7A1 C H sing 1.09 N N
93 C7A H7A2 C H sing 1.09 N N
94 C7A H7A3 C H sing 1.09 N N
95 C8A N3A C N sing 1.47 N N
96 C8A H8A1 C H sing 1.09 N N
97 C8A H8A2 C H sing 1.09 N N
98 C8A H8A3 C H sing 1.09 N N
99 O2A HO2A O H sing 0.97 N N
100 C1B C2B C C sing 1.53 N N
101 C1B O1B C O sing 1.44 N N
102 C1B O5B C O sing 1.42 N N
103 C1B H1B1 C H sing 1.09 N N
104 C2B C3B C C sing 1.53 N N
105 C2B H2B1 C H sing 1.09 N N
106 C2B H2B2 C H sing 1.09 N N
107 C3B C4B C C sing 1.52 N N
108 C3B C7B C C sing 1.53 N N
109 C3B O3B C O sing 1.44 N N
110 C4B C5B C C sing 1.52 N N
111 C4B O4B C O sing 1.44 N N
112 C4B H4B1 C H sing 1.1 N N
113 C5B C6B C C sing 1.53 N N
114 C5B O5B C O sing 1.41 N N
115 C5B H5B1 C H sing 1.12 N N
116 C6B H6B1 C H sing 1.09 N N
117 C6B H6B2 C H sing 1.09 N N
118 C6B H6B3 C H sing 1.09 N N
119 C7B H7B1 C H sing 1.09 N N
120 C7B H7B2 C H sing 1.09 N N
121 C7B H7B3 C H sing 1.09 N N
122 C8B O3B C O sing 1.43 N N
123 C8B H8B1 C H sing 1.09 N N
124 C8B H8B2 C H sing 1.09 N N
125 C8B H8B3 C H sing 1.09 N N
126 O4B HO4B O H sing 0.97 N N