Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : W54    

Bonds between two atoms of the molecule

Total Number of Bonds: 47


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C31 C3 C C sing 1.51 N N
2 C31 H311 C H sing 1.09 N N
3 C31 H312 C H sing 1.09 N N
4 C31 H313 C H sing 1.09 N N
5 C3 C4 C C sing 1.41 N Y
6 C3 N2 C N doub 1.3 N Y
7 C4 C5 C C doub 1.35 N Y
8 C4 H4 C H sing 1.08 N N
9 C5 O1 C O sing 1.34 N Y
10 C5 C1C C C sing 1.51 N N
11 O1 N2 O N sing 1.21 N Y
12 C1C C2C C C sing 1.53 N N
13 C1C H1C1 C H sing 1.09 N N
14 C1C H1C2 C H sing 1.09 N N
15 C2C C3C C C sing 1.53 N N
16 C2C H2C1 C H sing 1.09 N N
17 C2C H2C2 C H sing 1.09 N N
18 C3C C4C C C sing 1.53 N N
19 C3C H3C1 C H sing 1.09 N N
20 C3C H3C2 C H sing 1.09 N N
21 C4C C5C C C sing 1.53 N N
22 C4C H4C1 C H sing 1.09 N N
23 C4C H4C2 C H sing 1.09 N N
24 C5C O1B C O sing 1.43 N N
25 C5C H5C1 C H sing 1.09 N N
26 C5C H5C2 C H sing 1.09 N N
27 O1B C1B O C sing 1.36 N N
28 C1B C2B C C doub 1.39 N Y
29 C1B C6B C C sing 1.39 N Y
30 C2B CL1 C CL sing 1.74 N N
31 C2B C3B C C sing 1.38 N Y
32 C3B C4B C C doub 1.4 N Y
33 C3B H3B C H sing 1.08 N N
34 C4B C5B C C sing 1.4 N Y
35 C4B C2A C C sing 1.48 N N
36 C5B C6B C C doub 1.38 N Y
37 C5B H5B C H sing 1.08 N N
38 C6B CL2 C CL sing 1.74 N N
39 C2A N3A C N doub 1.3 N N
40 C2A O1A C O sing 1.35 N N
41 N3A C4A N C sing 1.48 N N
42 C4A C5A C C sing 1.55 N N
43 C4A H4A1 C H sing 1.09 N N
44 C4A H4A2 C H sing 1.09 N N
45 C5A O1A C O sing 1.44 N N
46 C5A H5A1 C H sing 1.09 N N
47 C5A H5A2 C H sing 1.09 N N