Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : VGH    

Bonds between two atoms of the molecule

Total Number of Bonds: 55


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CL C13 CL C sing 1.74 N N
2 C13 C3 C C sing 1.38 N Y
3 C13 C17 C C doub 1.38 N Y
4 C3 C2 C C doub 1.38 N Y
5 C2 C12 C C sing 1.38 N Y
6 C12 F C F sing 1.35 N N
7 C12 C18 C C doub 1.39 N Y
8 C17 C18 C C sing 1.38 N Y
9 C17 C21 C C sing 1.51 N N
10 C18 CL2 C CL sing 1.74 N N
11 C21 C1 C C sing 1.53 N N
12 C21 O27 C O sing 1.43 N N
13 O27 C15 O C sing 1.36 N N
14 C15 C4 C C doub 1.39 N Y
15 C15 C19 C C sing 1.4 N Y
16 C4 C14 C C sing 1.4 N Y
17 C19 N22 C N sing 1.39 N N
18 C19 N23 C N doub 1.32 N Y
19 N23 C5 N C sing 1.32 N Y
20 C5 C14 C C doub 1.39 N Y
21 C14 C16 C C sing 1.49 N Y
22 C16 C6 C C sing 1.41 N Y
23 C16 C7 C C doub 1.36 N Y
24 C6 N24 C N doub 1.31 N Y
25 C7 N26 C N sing 1.35 N Y
26 N26 N24 N N sing 1.4 N Y
27 N26 C20 N C sing 1.46 N N
28 C20 C8 C C sing 1.53 N N
29 C20 C9 C C sing 1.53 N N
30 C8 C10 C C sing 1.53 N N
31 C10 N25 C N sing 1.47 N N
32 N25 C11 N C sing 1.47 N N
33 C11 C9 C C sing 1.53 N N
34 C3 H3 C H sing 1.08 N N
35 C2 H2 C H sing 1.08 N N
36 C21 H21 C H sing 1.09 N N
37 C1 H11C C H sing 1.09 N N
38 C1 H12C C H sing 1.09 N N
39 C1 H13C C H sing 1.09 N N
40 C4 H4 C H sing 1.08 N N
41 N22 H221 N H sing 0.97 N N
42 N22 H222 N H sing 0.97 N N
43 C5 H5 C H sing 1.08 N N
44 C6 H6 C H sing 1.08 N N
45 C7 H7 C H sing 1.08 N N
46 C20 H20 C H sing 1.09 N N
47 C8 H81C C H sing 1.09 N N
48 C8 H82C C H sing 1.09 N N
49 C9 H91C C H sing 1.09 N N
50 C9 H92C C H sing 1.09 N N
51 C10 H101 C H sing 1.09 N N
52 C10 H102 C H sing 1.09 N N
53 N25 H25 N H sing 1.01 N N
54 C11 H111 C H sing 1.09 N N
55 C11 H112 C H sing 1.09 N N