Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : UBC    

Bonds between two atoms of the molecule

Total Number of Bonds: 40


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 C10 O C sing 1.35 N N
2 O1 HO1 O H sing 0.97 N N
3 C10 O2 C O doub 1.21 N N
4 C10 C22 C C sing 1.48 N N
5 C22 C23 C C doub 1.4 N Y
6 C22 C21 C C sing 1.4 N Y
7 C23 C24 C C sing 1.38 N Y
8 C23 H23 C H sing 1.08 N N
9 C24 C25 C C doub 1.38 N Y
10 C24 H24 C H sing 1.08 N N
11 C25 C26 C C sing 1.38 N Y
12 C25 H25 C H sing 1.08 N N
13 C26 C21 C C doub 1.38 N Y
14 C26 H26 C H sing 1.08 N N
15 C21 C17 C C sing 1.51 N N
16 C17 N6 C N sing 1.46 N N
17 C17 H171 C H sing 1.09 N N
18 C17 H172 C H sing 1.09 N N
19 N6 C5 N C sing 1.35 N Y
20 N6 C1 N C sing 1.35 N Y
21 C5 O8 C O doub 1.22 N N
22 C5 N4 C N sing 1.35 N Y
23 C1 O7 C O doub 1.22 N N
24 C1 C2 C C sing 1.41 N Y
25 C2 C3 C C doub 1.35 N Y
26 C2 H2 C H sing 1.08 N N
27 C3 N4 C N sing 1.37 N Y
28 C3 H3 C H sing 1.08 N N
29 N4 CB N C sing 1.47 N N
30 CB CA C C sing 1.53 N N
31 CB HB1 C H sing 1.09 N N
32 CB HB2 C H sing 1.09 N N
33 CA N C N sing 1.47 N N
34 CA C C C sing 1.51 N N
35 CA HA C H sing 1.09 N N
36 N HN1 N H sing 1.01 N N
37 N HN2 N H sing 1.01 N N
38 C O C O sing 1.34 N N
39 C OXT C O doub 1.21 N N
40 O HO O H sing 0.97 N N