Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : U6D    

Bonds between two atoms of the molecule

Total Number of Bonds: 73


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 F29 C28 F C sing 1.35 N N
2 C20 C19 C C sing 1.53 N N
3 C1 C2 C C sing 1.53 N N
4 C21 C19 C C sing 1.53 N N
5 C19 C18 C C sing 1.53 N N
6 C19 F22 C F sing 1.4 N N
7 C28 C27 C C doub 1.38 N Y
8 C28 C23 C C sing 1.38 N Y
9 N17 C15 N C sing 1.47 N N
10 N17 C2 N C sing 1.47 N N
11 N17 C18 N C sing 1.47 N N
12 C15 C23 C C sing 1.51 N N
13 C15 C14 C C sing 1.51 N N
14 C2 C4 C C sing 1.53 N N
15 C27 C26 C C sing 1.39 N Y
16 C23 C24 C C doub 1.38 N Y
17 C14 N12 C N sing 1.37 N Y
18 C14 C5 C C doub 1.35 N Y
19 N12 C11 N C sing 1.37 N Y
20 C4 C5 C C sing 1.51 N N
21 C5 C6 C C sing 1.45 N Y
22 C26 O30 C O sing 1.36 N N
23 C26 C25 C C doub 1.39 N Y
24 C11 C6 C C doub 1.42 N Y
25 C11 C10 C C sing 1.39 N Y
26 C24 C25 C C sing 1.38 N Y
27 C24 F39 C F sing 1.35 N N
28 O30 C31 O C sing 1.43 N N
29 C6 C7 C C sing 1.4 N Y
30 C10 C9 C C doub 1.38 N Y
31 C7 C8 C C doub 1.37 N Y
32 C9 C8 C C sing 1.39 N Y
33 C31 C32 C C sing 1.53 N N
34 C32 N33 C N sing 1.47 N N
35 N33 C34 N C sing 1.48 N N
36 N33 C36 N C sing 1.48 N N
37 C34 C35 C C sing 1.54 N N
38 C36 C35 C C sing 1.54 N N
39 C35 C37 C C sing 1.53 N N
40 C37 F38 C F sing 1.4 N N
41 C4 H1 C H sing 1.09 N N
42 C4 H2 C H sing 1.09 N N
43 C7 H3 C H sing 1.08 N N
44 C8 H4 C H sing 1.08 N N
45 C9 H5 C H sing 1.08 N N
46 C10 H6 C H sing 1.08 N N
47 C1 H7 C H sing 1.09 N N
48 C1 H8 C H sing 1.09 N N
49 C1 H9 C H sing 1.09 N N
50 C15 H10 C H sing 1.09 N N
51 C18 H11 C H sing 1.09 N N
52 C18 H12 C H sing 1.09 N N
53 C2 H13 C H sing 1.09 N N
54 C20 H14 C H sing 1.09 N N
55 C20 H15 C H sing 1.09 N N
56 C20 H16 C H sing 1.09 N N
57 C21 H17 C H sing 1.09 N N
58 C21 H18 C H sing 1.09 N N
59 C21 H19 C H sing 1.09 N N
60 C25 H20 C H sing 1.08 N N
61 C27 H21 C H sing 1.08 N N
62 C31 H22 C H sing 1.09 N N
63 C31 H23 C H sing 1.09 N N
64 C32 H24 C H sing 1.09 N N
65 C32 H25 C H sing 1.09 N N
66 C34 H26 C H sing 1.09 N N
67 C34 H27 C H sing 1.09 N N
68 C35 H28 C H sing 1.09 N N
69 C36 H29 C H sing 1.09 N N
70 C36 H30 C H sing 1.09 N N
71 C37 H31 C H sing 1.09 N N
72 C37 H32 C H sing 1.09 N N
73 N12 H33 N H sing 0.97 N N