Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : RID    

Bonds between two atoms of the molecule

Total Number of Bonds: 81


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C12 N1 C N sing 1.36 N Y
2 C5 N1 C N sing 1.37 N Y
3 N1 C7 N C sing 1.47 N N
4 C26 N3 C N sing 1.47 N N
5 C17 N3 C N sing 1.47 N N
6 N3 S1 N S sing 1.66 N N
7 C1 C5 C C doub 1.38 N Y
8 C5 C27 C C sing 1.48 N Y
9 C14 C6 C C sing 1.53 N N
10 C12 C6 C C sing 1.51 N N
11 C6 C13 C C sing 1.53 N N
12 C6 H6 C H sing 1.09 N N
13 C7 C8 C C sing 1.53 N N
14 C7 H7 C H sing 1.09 N N
15 C7 H7A C H sing 1.09 N N
16 C8 C9 C C sing 1.53 N N
17 C8 H8 C H sing 1.09 N N
18 C8 H8A C H sing 1.09 N N
19 C9 C10 C C sing 1.53 N N
20 C10 C11 C C sing 1.53 N N
21 C10 H10 C H sing 1.09 N N
22 C10 H10A C H sing 1.09 N N
23 C13 H13 C H sing 1.09 N N
24 C13 H13A C H sing 1.09 N N
25 C13 H13B C H sing 1.09 N N
26 C18 C15 C C doub 1.38 N Y
27 C15 C30 C C sing 1.39 N Y
28 C15 H15 C H sing 1.08 N N
29 C20 C17 C C sing 1.53 N N
30 C17 H17 C H sing 1.09 N N
31 C17 H17A C H sing 1.09 N N
32 O1 C20 O C sing 1.43 N N
33 C20 H20 C H sing 1.09 N N
34 C20 H20A C H sing 1.09 N N
35 C27 C21 C C doub 1.4 N Y
36 C21 C24 C C sing 1.38 N Y
37 C21 H21 C H sing 1.08 N N
38 C28 C22 C C doub 1.38 N Y
39 C22 C25 C C sing 1.38 N Y
40 C22 H22 C H sing 1.08 N N
41 C30 C24 C C doub 1.39 N Y
42 C24 H24 C H sing 1.08 N N
43 C23 C26 C C sing 1.53 N N
44 C26 H26 C H sing 1.09 N N
45 C26 H26A C H sing 1.09 N N
46 C19 C28 C C sing 1.38 N Y
47 C28 H28 C H sing 1.08 N N
48 S1 O5 S O doub 1.42 N N
49 S1 O2 S O doub 1.42 N N
50 S1 C2 S C sing 1.76 N N
51 O1 C23 O C sing 1.43 N N
52 C23 H23 C H sing 1.09 N N
53 C23 H23A C H sing 1.09 N N
54 C2 C1 C C sing 1.41 N Y
55 C2 C12 C C doub 1.35 N Y
56 C31 C1 C C sing 1.48 N Y
57 C16 C31 C C sing 1.39 N Y
58 C31 C25 C C doub 1.39 N Y
59 C25 H25 C H sing 1.08 N N
60 C19 C16 C C doub 1.38 N Y
61 C19 H19 C H sing 1.08 N N
62 C16 H16 C H sing 1.08 N N
63 C14 H14 C H sing 1.09 N N
64 C14 H14A C H sing 1.09 N N
65 C14 H14B C H sing 1.09 N N
66 C18 C27 C C sing 1.4 N Y
67 C30 F1 C F sing 1.35 N N
68 C18 H18 C H sing 1.08 N N
69 C9 O4 C O sing 1.43 N N
70 C9 H9 C H sing 1.09 N N
71 O4 HO4 O H sing 0.97 N N
72 O3 C11 O C sing 1.43 N N
73 C11 C35 C C sing 1.53 N N
74 C11 H11 C H sing 1.09 N N
75 O3 HO3 O H sing 0.97 N N
76 C36 C35 C C sing 1.51 N N
77 C35 H35 C H sing 1.09 N N
78 C35 H35A C H sing 1.09 N N
79 O7 C36 O C doub 1.21 N N
80 C36 O6 C O sing 1.34 N N
81 O6 HO6 O H sing 0.97 N N