Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : PNX    

Bonds between two atoms of the molecule

Total Number of Bonds: 39


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAA CAM C C sing 1.51 N N
2 CAA HAA1 C H sing 1.09 N N
3 CAA HAA2 C H sing 1.09 N N
4 CAA HAA3 C H sing 1.09 N N
5 CAM OAD C O doub 1.21 N N
6 CAM CAJ C C sing 1.51 N N
7 CAJ CAH C C sing 1.53 N N
8 CAJ HAJ1 C H sing 1.09 N N
9 CAJ HAJ2 C H sing 1.09 N N
10 CAH CAI C C sing 1.53 N N
11 CAH HAH1 C H sing 1.09 N N
12 CAH HAH2 C H sing 1.09 N N
13 CAI CAK C C sing 1.53 N N
14 CAI HAI1 C H sing 1.09 N N
15 CAI HAI2 C H sing 1.09 N N
16 CAK N1 C N sing 1.46 N N
17 CAK HAK1 C H sing 1.09 N N
18 CAK HAK2 C H sing 1.09 N N
19 N1 C6 N C sing 1.35 N Y
20 N1 C2 N C sing 1.34 N Y
21 C6 O6 C O doub 1.22 N N
22 C6 C5 C C sing 1.41 N Y
23 C5 N7 C N sing 1.38 N Y
24 C5 C4 C C doub 1.39 N Y
25 N7 CAB N C sing 1.47 N N
26 N7 C8 N C sing 1.35 N Y
27 CAB HAB1 C H sing 1.09 N N
28 CAB HAB2 C H sing 1.09 N N
29 CAB HAB3 C H sing 1.09 N N
30 C8 N9 C N doub 1.31 N Y
31 C8 H8 C H sing 1.08 N N
32 N9 C4 N C sing 1.34 N Y
33 C4 N3 C N sing 1.39 N Y
34 N3 CAC N C sing 1.46 N N
35 N3 C2 N C sing 1.35 N Y
36 CAC HAC1 C H sing 1.09 N N
37 CAC HAC2 C H sing 1.09 N N
38 CAC HAC3 C H sing 1.09 N N
39 C2 O2 C O doub 1.22 N N