Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : P53    

Bonds between two atoms of the molecule

Total Number of Bonds: 44


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 P O2P P O sing 1.61 N N
2 P O1P P O sing 1.61 N N
3 C1A C10 C C sing 1.38 N Y
4 C1A H1A C H sing 1.08 N N
5 C2A C1A C C doub 1.38 N Y
6 C2A C4A C C sing 1.38 N Y
7 C2A H2A C H sing 1.08 N N
8 C4A C6A C C doub 1.38 N Y
9 C4A H4A C H sing 1.08 N N
10 C6A C8 C C sing 1.39 N Y
11 C6A H6 C H sing 1.08 N N
12 O6 P O P sing 1.61 N N
13 O6 C6 O C sing 1.43 N N
14 C8 O1 C O sing 1.36 N N
15 C10 C8 C C doub 1.39 N Y
16 C10 C13 C C sing 1.51 N N
17 C13 H13 C H sing 1.09 N N
18 O15 C13 O C sing 1.43 N N
19 O1 C1 O C sing 1.43 N N
20 C1 O5 C O sing 1.43 N N
21 C1 H1 C H sing 1.09 N N
22 O1P HO1P O H sing 0.97 N N
23 C2 C1 C C sing 1.53 N N
24 C2 C3 C C sing 1.53 N N
25 C2 H2 C H sing 1.09 N N
26 C3 C4 C C sing 1.53 N N
27 C3 H3 C H sing 1.09 N N
28 C4 C5 C C sing 1.53 N N
29 C4 O4 C O sing 1.43 N N
30 C4 H4 C H sing 1.09 N N
31 C5 C6 C C sing 1.53 N N
32 C5 H5 C H sing 1.09 N N
33 O5 C5 O C sing 1.43 N N
34 O2P HO2P O H sing 0.97 N N
35 O2 C2 O C sing 1.43 N N
36 O2 HO2 O H sing 0.97 N N
37 O3 C3 O C sing 1.43 N N
38 O3 HO3 O H sing 0.97 N N
39 O4 HO4 O H sing 0.97 N N
40 C6 H61 C H sing 1.09 N N
41 C6 H62 C H sing 1.09 N N
42 O3P P O P doub 1.48 N N
43 C13 H18 C H sing 1.09 N N
44 O15 H191 O H sing 0.97 N N