Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : NJV    

Bonds between two atoms of the molecule

Total Number of Bonds: 61


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N6 N7 N N sing 1.29 N Y
2 N6 C21 N C doub 1.31 N Y
3 N7 C20 N C doub 1.31 N Y
4 C17 C18 C C doub 1.39 N Y
5 C17 C16 C C sing 1.39 N Y
6 C21 N5 C N sing 1.35 N Y
7 C18 C19 C C sing 1.39 N Y
8 C20 C16 C C sing 1.48 N N
9 C20 N5 C N sing 1.37 N Y
10 C16 NH1 C N doub 1.33 N Y
11 N5 C22 N C sing 1.46 N N
12 C19 CZ C C doub 1.39 N Y
13 NH1 CZ N C sing 1.32 N Y
14 CZ NE C N sing 1.39 N N
15 C22 C23 C C sing 1.53 N N
16 C22 C24 C C sing 1.53 N N
17 NE CD N C sing 1.35 N N
18 O1 CD O C doub 1.22 N N
19 CD CG C C sing 1.48 N N
20 F1 C1 F C sing 1.35 N N
21 CG C1 C C doub 1.4 N Y
22 CG CB C C sing 1.4 N Y
23 C1 C6 C C sing 1.38 N Y
24 CB CA C C doub 1.38 N Y
25 C6 C C C doub 1.38 N Y
26 C8 N2 C N doub 1.31 N Y
27 C8 N C N sing 1.36 N Y
28 CA C C C sing 1.39 N Y
29 CA N C N sing 1.4 N N
30 C C7 C C sing 1.51 N N
31 N2 C9 N C sing 1.34 N Y
32 N C10 N C sing 1.37 N Y
33 C9 C10 C C doub 1.35 N Y
34 C9 C11 C C sing 1.51 N N
35 C13 C11 C C sing 1.53 N N
36 C13 C12 C C sing 1.53 N N
37 C11 C12 C C sing 1.53 N N
38 C6 H1 C H sing 1.08 N N
39 C11 H2 C H sing 1.09 N N
40 C12 H3 C H sing 1.09 N N
41 C12 H4 C H sing 1.09 N N
42 CB H5 C H sing 1.08 N N
43 NE H6 N H sing 0.97 N N
44 C10 H7 C H sing 1.08 N N
45 C13 H8 C H sing 1.09 N N
46 C13 H9 C H sing 1.09 N N
47 C17 H10 C H sing 1.08 N N
48 C18 H11 C H sing 1.08 N N
49 C19 H12 C H sing 1.08 N N
50 C21 H13 C H sing 1.08 N N
51 C22 H14 C H sing 1.09 N N
52 C23 H15 C H sing 1.09 N N
53 C23 H16 C H sing 1.09 N N
54 C23 H17 C H sing 1.09 N N
55 C24 H18 C H sing 1.09 N N
56 C24 H19 C H sing 1.09 N N
57 C24 H20 C H sing 1.09 N N
58 C7 H21 C H sing 1.09 N N
59 C7 H22 C H sing 1.09 N N
60 C7 H23 C H sing 1.09 N N
61 C8 H24 C H sing 1.08 N N