Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : MJG    

Bonds between two atoms of the molecule

Total Number of Bonds: 87


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 C1 C C doub 1.4 N Y
2 C1 C6 C C sing 1.39 N Y
3 C1 O7 C O sing 1.36 N N
4 C3 C2 C C sing 1.4 N Y
5 C9 C2 C C sing 1.48 N N
6 C3 C4 C C doub 1.38 N Y
7 C3 H3 C H sing 1.08 N N
8 S20 C4 S C sing 1.76 N N
9 C4 C5 C C sing 1.39 N Y
10 C5 C42 C C sing 1.51 N N
11 C5 C6 C C doub 1.38 N Y
12 C6 H6 C H sing 1.08 N N
13 O7 C8 O C sing 1.43 N N
14 C8 H8 C H sing 1.09 N N
15 C8 H8A C H sing 1.09 N N
16 C8 H8B C H sing 1.09 N N
17 O11 C9 O C doub 1.22 N N
18 C9 N10 C N sing 1.35 N N
19 C12 N10 C N sing 1.47 N N
20 N10 C16 N C sing 1.47 N N
21 C13 C12 C C sing 1.53 N N
22 C12 H12 C H sing 1.09 N N
23 C12 H12A C H sing 1.09 N N
24 C13 N14 C N sing 1.47 N N
25 C13 H13 C H sing 1.09 N N
26 C13 H13A C H sing 1.09 N N
27 N14 C17 N C sing 1.35 N N
28 N14 C15 N C sing 1.47 N N
29 C15 C16 C C sing 1.54 N N
30 C15 H15 C H sing 1.09 N N
31 C15 H15A C H sing 1.09 N N
32 C16 H16 C H sing 1.09 N N
33 C16 H16A C H sing 1.09 N N
34 C18 C17 C C sing 1.51 N N
35 C17 O19 C O doub 1.21 N N
36 C18 H18 C H sing 1.09 N N
37 C18 H18A C H sing 1.09 N N
38 C18 H18B C H sing 1.09 N N
39 S20 C22 S C sing 1.76 N N
40 C22 C21 C C doub 1.34 N Y
41 C21 N25 C N sing 1.32 N Y
42 C21 H21 C H sing 1.08 N N
43 S23 C22 S C sing 1.76 N Y
44 S23 C24 S C sing 1.76 N Y
45 C24 N26 C N sing 1.39 N N
46 C24 N25 C N doub 1.3 N Y
47 C27 N26 C N sing 1.35 N N
48 N26 HN26 N H sing 0.97 N N
49 O34 C27 O C doub 1.22 N N
50 C27 C28 C C sing 1.48 N N
51 C33 C28 C C doub 1.4 N Y
52 C28 C29 C C sing 1.4 N Y
53 C29 C30 C C doub 1.38 N Y
54 C29 H29 C H sing 1.08 N N
55 C31 C30 C C sing 1.38 N Y
56 C30 H30 C H sing 1.08 N N
57 C32 C31 C C doub 1.38 N Y
58 C31 C35 C C sing 1.51 N N
59 C33 C32 C C sing 1.38 N Y
60 C32 H32 C H sing 1.08 N N
61 C33 H33 C H sing 1.08 N N
62 N36 C35 N C sing 1.47 N N
63 C35 H35 C H sing 1.09 N N
64 C35 H35A C H sing 1.09 N N
65 C37 N36 C N sing 1.47 N N
66 N36 HN36 N H sing 1.01 N N
67 C38 C37 C C sing 1.53 N N
68 C43 C37 C C sing 1.53 N N
69 C37 H37 C H sing 1.09 N N
70 C40 C38 C C sing 1.53 N N
71 C41 C38 C C sing 1.53 N N
72 C38 C39 C C sing 1.53 N N
73 C39 H39 C H sing 1.09 N N
74 C39 H39A C H sing 1.09 N N
75 C39 H39B C H sing 1.09 N N
76 C40 H40 C H sing 1.09 N N
77 C40 H40A C H sing 1.09 N N
78 C40 H40B C H sing 1.09 N N
79 C41 H41 C H sing 1.09 N N
80 C41 H41A C H sing 1.09 N N
81 C41 H41B C H sing 1.09 N N
82 C42 H42 C H sing 1.09 N N
83 C42 H42A C H sing 1.09 N N
84 C42 H42B C H sing 1.09 N N
85 C43 H43 C H sing 1.09 N N
86 C43 H43A C H sing 1.09 N N
87 C43 H43B C H sing 1.09 N N