Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : M9B    

Bonds between two atoms of the molecule

Total Number of Bonds: 75


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 C1 O C sing 1.43 N N
2 C2 C1 C C sing 1.53 N N
3 C2 C3 C C sing 1.53 N N
4 C26 C25 C C sing 1.53 N N
5 C1 C6 C C sing 1.52 N N
6 C27 C25 C C sing 1.53 N N
7 C19 C6 C C doub 1.33 N N
8 C25 C24 C C sing 1.53 N N
9 C6 C5 C C sing 1.48 N N
10 C3 C4 C C sing 1.53 N N
11 C3 O C O sing 1.43 N N
12 C4 C5 C C sing 1.52 N N
13 C24 C23 C C sing 1.53 N N
14 C5 C7 C C doub 1.35 Z N
15 C23 C22 C C sing 1.53 N N
16 C18 C13 C C sing 1.53 N N
17 C7 C8 C C sing 1.46 N N
18 C8 C9 C C doub 1.33 E N
19 C22 C20 C C sing 1.53 N N
20 C20 C17 C C sing 1.53 N N
21 C20 C21 C C sing 1.53 N N
22 C13 C12 C C sing 1.51 N N
23 C13 C14 C C sing 1.56 N N
24 C13 C17 C C sing 1.52 N N
25 C9 C14 C C sing 1.5 N N
26 C9 C10 C C sing 1.52 N N
27 C11 C12 C C sing 1.53 N N
28 C11 C10 C C sing 1.53 N N
29 C15 C16 C C sing 1.55 N N
30 C15 C14 C C sing 1.53 N N
31 C16 C17 C C sing 1.58 N N
32 C4 H1 C H sing 1.09 N N
33 C4 H2 C H sing 1.09 N N
34 C14 H3 C H sing 1.09 N N
35 C11 H4 C H sing 1.09 N N
36 C11 H5 C H sing 1.09 N N
37 C7 H6 C H sing 1.08 N N
38 C8 H7 C H sing 1.08 N N
39 C10 H8 C H sing 1.09 N N
40 C10 H9 C H sing 1.09 N N
41 C12 H10 C H sing 1.09 N N
42 C12 H11 C H sing 1.09 N N
43 C3 H12 C H sing 1.09 N N
44 O H13 O H sing 0.97 N N
45 C1 H14 C H sing 1.09 N N
46 C15 H15 C H sing 1.09 N N
47 C15 H16 C H sing 1.09 N N
48 C16 H17 C H sing 1.09 N N
49 C16 H18 C H sing 1.09 N N
50 C17 H19 C H sing 1.09 N N
51 C18 H20 C H sing 1.09 N N
52 C18 H21 C H sing 1.09 N N
53 C18 H22 C H sing 1.09 N N
54 C19 H23 C H sing 1.08 N N
55 C19 H24 C H sing 1.08 N N
56 C2 H25 C H sing 1.09 N N
57 C2 H26 C H sing 1.09 N N
58 C20 H27 C H sing 1.09 N N
59 C21 H28 C H sing 1.09 N N
60 C21 H29 C H sing 1.09 N N
61 C21 H30 C H sing 1.09 N N
62 C22 H31 C H sing 1.09 N N
63 C22 H32 C H sing 1.09 N N
64 C23 H33 C H sing 1.09 N N
65 C23 H34 C H sing 1.09 N N
66 C24 H35 C H sing 1.09 N N
67 C24 H36 C H sing 1.09 N N
68 C25 H37 C H sing 1.09 N N
69 C26 H38 C H sing 1.09 N N
70 C26 H39 C H sing 1.09 N N
71 C26 H40 C H sing 1.09 N N
72 C27 H41 C H sing 1.09 N N
73 C27 H42 C H sing 1.09 N N
74 C27 H43 C H sing 1.09 N N
75 O1 H44 O H sing 0.97 N N