Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : LP4    

Bonds between two atoms of the molecule

Total Number of Bonds: 114


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 C1 C C sing 1.53 N N
2 C1 O5 C O sing 1.43 N N
3 C1 O1 C O sing 1.43 N N
4 C1 H1 C H sing 1.09 N N
5 O1 HO1 O H sing 0.97 N N
6 C3 C2 C C sing 1.53 N N
7 N2 C2 N C sing 1.46 N N
8 C2 H2 C H sing 1.09 N N
9 N2 C7 N C sing 1.35 N N
10 N2 HN2 N H sing 0.97 N N
11 O3 C3 O C sing 1.45 N N
12 C3 C4 C C sing 1.53 N N
13 C3 H3 C H sing 1.09 N N
14 C28 O3 C O sing 1.34 N N
15 O4 C4 O C sing 1.43 N N
16 C4 C5 C C sing 1.53 N N
17 C4 H4 C H sing 1.09 N N
18 P45 O4 P O sing 1.61 N N
19 C5 C6 C C sing 1.53 N N
20 C5 O5 C O sing 1.43 N N
21 C5 H5 C H sing 1.09 N N
22 C6 O6 C O sing 1.43 N N
23 C6 H6 C H sing 1.09 N N
24 C6 H6A C H sing 1.09 N N
25 O6 HO6 O H sing 0.97 N N
26 C8 C7 C C sing 1.51 N N
27 C7 O7 C O doub 1.21 N N
28 C8 C16 C C sing 1.53 N N
29 C8 H8 C H sing 1.09 N N
30 C8 H8A C H sing 1.09 N N
31 C17 C16 C C sing 1.53 N N
32 C16 O44 C O sing 1.43 N N
33 C16 H16 C H sing 1.09 N N
34 C17 C18 C C sing 1.53 N N
35 C17 H17 C H sing 1.09 N N
36 C17 H17A C H sing 1.09 N N
37 C19 C18 C C sing 1.53 N N
38 C18 H18 C H sing 1.09 N N
39 C18 H18A C H sing 1.09 N N
40 C19 C20 C C sing 1.53 N N
41 C19 H19 C H sing 1.09 N N
42 C19 H19A C H sing 1.09 N N
43 C20 C21 C C sing 1.53 N N
44 C20 H20 C H sing 1.09 N N
45 C20 H20A C H sing 1.09 N N
46 C22 C21 C C sing 1.53 N N
47 C21 H21 C H sing 1.09 N N
48 C21 H21A C H sing 1.09 N N
49 C23 C22 C C sing 1.53 N N
50 C22 H22 C H sing 1.09 N N
51 C22 H22A C H sing 1.09 N N
52 C24 C23 C C sing 1.53 N N
53 C23 H23 C H sing 1.09 N N
54 C23 H23A C H sing 1.09 N N
55 C25 C24 C C sing 1.53 N N
56 C24 H24 C H sing 1.09 N N
57 C24 H24A C H sing 1.09 N N
58 C26 C25 C C sing 1.53 N N
59 C25 H25 C H sing 1.09 N N
60 C25 H25A C H sing 1.09 N N
61 C27 C26 C C sing 1.53 N N
62 C26 H26 C H sing 1.09 N N
63 C26 H26A C H sing 1.09 N N
64 C27 H27 C H sing 1.09 N N
65 C27 H27A C H sing 1.09 N N
66 C27 H27B C H sing 1.09 N N
67 C29 C28 C C sing 1.51 N N
68 O42 C28 O C doub 1.21 N N
69 C30 C29 C C sing 1.53 N N
70 C29 H29 C H sing 1.09 N N
71 C29 H29A C H sing 1.09 N N
72 C31 C30 C C sing 1.53 N N
73 O43 C30 O C sing 1.43 N N
74 C30 H30 C H sing 1.09 N N
75 C32 C31 C C sing 1.53 N N
76 C31 H31 C H sing 1.09 N N
77 C31 H31A C H sing 1.09 N N
78 C33 C32 C C sing 1.53 N N
79 C32 H32 C H sing 1.09 N N
80 C32 H32A C H sing 1.09 N N
81 C33 C34 C C sing 1.53 N N
82 C33 H33 C H sing 1.09 N N
83 C33 H33A C H sing 1.09 N N
84 C34 C35 C C sing 1.53 N N
85 C34 H34 C H sing 1.09 N N
86 C34 H34A C H sing 1.09 N N
87 C36 C35 C C sing 1.53 N N
88 C35 H35 C H sing 1.09 N N
89 C35 H35A C H sing 1.09 N N
90 C36 C37 C C sing 1.53 N N
91 C36 H36 C H sing 1.09 N N
92 C36 H36A C H sing 1.09 N N
93 C37 C38 C C sing 1.53 N N
94 C37 H37 C H sing 1.09 N N
95 C37 H37A C H sing 1.09 N N
96 C38 C39 C C sing 1.53 N N
97 C38 H38 C H sing 1.09 N N
98 C38 H38A C H sing 1.09 N N
99 C39 C40 C C sing 1.53 N N
100 C39 H39 C H sing 1.09 N N
101 C39 H39A C H sing 1.09 N N
102 C40 C41 C C sing 1.53 N N
103 C40 H40 C H sing 1.09 N N
104 C40 H40A C H sing 1.09 N N
105 C41 H41 C H sing 1.09 N N
106 C41 H41A C H sing 1.09 N N
107 C41 H41B C H sing 1.09 N N
108 O43 HO43 O H sing 0.97 N N
109 O44 HO44 O H sing 0.97 N N
110 O48 P45 O P doub 1.48 N N
111 O47 P45 O P sing 1.61 N N
112 P45 O46 P O sing 1.61 N N
113 O46 HO46 O H sing 0.97 N N
114 O47 HO47 O H sing 0.97 N N