Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : LBM    

Bonds between two atoms of the molecule

Total Number of Bonds: 118


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C C1 C C sing 1.53 N N
2 C2 C1 C C sing 1.53 N N
3 C2 C3 C C sing 1.53 N N
4 C1 C6 C C sing 1.53 N N
5 C1 C44 C C sing 1.53 N N
6 C6 C5 C C sing 1.5 N N
7 C12 C11 C C doub 1.38 N Y
8 C12 C7 C C sing 1.4 N Y
9 C3 C4 C C sing 1.5 N N
10 C5 C4 C C doub 1.31 N N
11 C5 C7 C C sing 1.48 N N
12 C11 C10 C C sing 1.38 N Y
13 C4 C13 C C sing 1.51 N N
14 C7 C8 C C doub 1.4 N Y
15 C13 N C N sing 1.47 N N
16 C10 CL C CL sing 1.74 N N
17 C10 C9 C C doub 1.39 N Y
18 C8 C9 C C sing 1.38 N Y
19 N C17 N C sing 1.47 N N
20 N C14 N C sing 1.47 N N
21 C17 C16 C C sing 1.53 N N
22 C14 C15 C C sing 1.53 N N
23 C16 N1 C N sing 1.47 N N
24 C15 N1 C N sing 1.47 N N
25 N1 C18 N C sing 1.39 N N
26 C18 C23 C C doub 1.39 N Y
27 C18 C19 C C sing 1.39 N Y
28 C23 C22 C C sing 1.37 N Y
29 C19 C20 C C doub 1.38 N Y
30 C22 C21 C C doub 1.4 N Y
31 C20 O6 C O sing 1.36 N N
32 C20 C21 C C sing 1.4 N Y
33 O6 C37 O C sing 1.36 N N
34 C21 C24 C C sing 1.47 N N
35 C37 C41 C C doub 1.39 N Y
36 C37 C38 C C sing 1.39 N Y
37 C41 C40 C C sing 1.4 N Y
38 C38 N5 C N doub 1.32 N Y
39 C24 O C O doub 1.22 N N
40 C24 N2 C N sing 1.35 N N
41 C40 C39 C C doub 1.41 N Y
42 C40 C42 C C sing 1.46 N Y
43 N5 C39 N C sing 1.33 N Y
44 C39 N6 C N sing 1.38 N Y
45 C42 C43 C C doub 1.34 N Y
46 N2 S N S sing 1.66 N N
47 N6 C43 N C sing 1.37 N Y
48 S O1 S O doub 1.42 N N
49 S O2 S O doub 1.42 N N
50 S C25 S C sing 1.76 N N
51 C25 C30 C C doub 1.38 N Y
52 C25 C26 C C sing 1.38 N Y
53 C30 C29 C C sing 1.38 N Y
54 C26 C27 C C doub 1.38 N Y
55 C29 C28 C C doub 1.39 N Y
56 C27 C28 C C sing 1.39 N Y
57 C27 N4 C N sing 1.48 N N
58 O5 N4 O N doub 1.22 N N
59 C28 N3 C N sing 1.4 N N
60 N4 O4 N O sing 1.22 N N
61 N3 C31 N C sing 1.46 N N
62 C31 C32 C C sing 1.53 N N
63 C36 C32 C C sing 1.53 N N
64 C36 C35 C C sing 1.53 N N
65 C32 C33 C C sing 1.53 N N
66 C33 C34 C C sing 1.53 N N
67 C35 O3 C O sing 1.43 N N
68 O3 C34 O C sing 1.43 N N
69 C11 H1 C H sing 1.08 N N
70 C12 H2 C H sing 1.08 N N
71 C13 H3 C H sing 1.09 N N
72 C13 H4 C H sing 1.09 N N
73 C14 H5 C H sing 1.09 N N
74 C14 H6 C H sing 1.09 N N
75 C15 H7 C H sing 1.09 N N
76 C15 H8 C H sing 1.09 N N
77 C16 H9 C H sing 1.09 N N
78 C16 H10 C H sing 1.09 N N
79 C17 H11 C H sing 1.09 N N
80 C17 H12 C H sing 1.09 N N
81 C19 H13 C H sing 1.08 N N
82 C22 H14 C H sing 1.08 N N
83 C23 H15 C H sing 1.08 N N
84 C26 H16 C H sing 1.08 N N
85 C29 H17 C H sing 1.08 N N
86 C31 H18 C H sing 1.09 N N
87 C31 H19 C H sing 1.09 N N
88 C H21 C H sing 1.09 N N
89 C H22 C H sing 1.09 N N
90 C H23 C H sing 1.09 N N
91 C2 H24 C H sing 1.09 N N
92 C2 H25 C H sing 1.09 N N
93 C3 H26 C H sing 1.09 N N
94 C3 H27 C H sing 1.09 N N
95 C30 H28 C H sing 1.08 N N
96 C32 H29 C H sing 1.09 N N
97 C33 H30 C H sing 1.09 N N
98 C33 H31 C H sing 1.09 N N
99 C34 H32 C H sing 1.09 N N
100 C34 H33 C H sing 1.09 N N
101 C35 H34 C H sing 1.09 N N
102 C35 H35 C H sing 1.09 N N
103 C36 H36 C H sing 1.09 N N
104 C36 H37 C H sing 1.09 N N
105 C38 H38 C H sing 1.08 N N
106 C41 H39 C H sing 1.08 N N
107 C42 H40 C H sing 1.08 N N
108 C43 H41 C H sing 1.08 N N
109 C44 H42 C H sing 1.09 N N
110 C44 H43 C H sing 1.09 N N
111 C44 H44 C H sing 1.09 N N
112 C6 H45 C H sing 1.09 N N
113 C6 H46 C H sing 1.09 N N
114 C8 H47 C H sing 1.08 N N
115 C9 H48 C H sing 1.08 N N
116 N2 H49 N H sing 0.97 N N
117 N3 H50 N H sing 0.97 N N
118 N6 H51 N H sing 0.97 N N