Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : JPT    

Bonds between two atoms of the molecule

Total Number of Bonds: 27


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O3 C6 O C sing 1.43 N N
2 C6 C3 C C sing 1.51 N N
3 C3 O1 C O sing 1.34 N N
4 C3 C2 C C doub 1.35 N N
5 O1 C4 O C sing 1.34 N N
6 C2 C1 C C sing 1.42 N N
7 C13 C12 C C doub 1.33 N Y
8 C13 C8 C C sing 1.38 N Y
9 C12 S2 C S sing 1.76 N Y
10 C4 C7 C C sing 1.51 N N
11 C4 C5 C C doub 1.35 N N
12 C1 C5 C C sing 1.42 N N
13 C1 O2 C O doub 1.22 N N
14 C8 C7 C C sing 1.51 N N
15 C8 C11 C C doub 1.33 N Y
16 C5 O4 C O sing 1.36 N N
17 S2 C11 S C sing 1.76 N Y
18 C7 H7 C H sing 1.09 N N
19 C7 H1 C H sing 1.09 N N
20 C11 H11 C H sing 1.08 N N
21 C12 H12 C H sing 1.08 N N
22 C13 H13 C H sing 1.08 N N
23 C6 H62 C H sing 1.09 N N
24 C6 H61 C H sing 1.09 N N
25 O3 H3 O H sing 0.97 N N
26 O4 H4 O H sing 0.97 N N
27 C2 H2 C H sing 1.08 N N