Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : IU5    

Bonds between two atoms of the molecule

Total Number of Bonds: 71


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C10 C C sing 1.53 N N
2 C1 C2 C C sing 1.53 N N
3 C1 HC11 C H sing 1.09 N N
4 C1 HC12 C H sing 1.09 N N
5 C10 C19 C C sing 1.53 N N
6 C10 C5 C C sing 1.53 N N
7 C10 C9 C C sing 1.53 N N
8 C11 C12 C C sing 1.54 N N
9 C11 C9 C C sing 1.53 N N
10 C11 H111 C H sing 1.09 N N
11 C11 H112 C H sing 1.09 N N
12 C12 C13 C C sing 1.51 N N
13 C12 H121 C H sing 1.09 N N
14 C12 H122 C H sing 1.09 N N
15 C13 C14 C C sing 1.55 N N
16 C13 C17 C C sing 1.53 N N
17 C13 C18 C C sing 1.53 N N
18 C14 C15 C C sing 1.53 N N
19 C14 C8 C C sing 1.52 N N
20 C14 H141 C H sing 1.09 N N
21 C15 C16 C C sing 1.55 N N
22 C15 H151 C H sing 1.09 N N
23 C15 H152 C H sing 1.09 N N
24 C16 C17 C C sing 1.55 N N
25 C16 H161 C H sing 1.09 N N
26 C16 H162 C H sing 1.09 N N
27 C17 C20 C C sing 1.53 N N
28 C17 H171 C H sing 1.09 N N
29 C18 H181 C H sing 1.09 N N
30 C18 H182 C H sing 1.09 N N
31 C18 H183 C H sing 1.09 N N
32 C19 H191 C H sing 1.09 N N
33 C19 H192 C H sing 1.09 N N
34 C19 H193 C H sing 1.09 N N
35 O1A C7 O C sing 1.43 N N
36 O1A HOA1 O H sing 0.97 N N
37 O1B C3 O C sing 1.43 N N
38 O1B HOB1 O H sing 0.97 N N
39 C2 C3 C C sing 1.53 N N
40 C2 HC21 C H sing 1.09 N N
41 C2 HC22 C H sing 1.09 N N
42 C20 C21 C C sing 1.53 N N
43 C20 C22 C C sing 1.53 N N
44 C20 H201 C H sing 1.09 N N
45 C21 H211 C H sing 1.09 N N
46 C21 H212 C H sing 1.09 N N
47 C21 H213 C H sing 1.09 N N
48 C22 C23 C C sing 1.53 N N
49 C22 H221 C H sing 1.09 N N
50 C22 H222 C H sing 1.09 N N
51 C23 C24 C C sing 1.51 N N
52 C23 H231 C H sing 1.09 N N
53 C23 H232 C H sing 1.09 N N
54 C24 O4 C O doub 1.21 N N
55 C24 O4A C O sing 1.34 N N
56 C3 C4 C C sing 1.53 N N
57 C3 HC31 C H sing 1.09 N N
58 C4 C5 C C sing 1.53 N N
59 C4 HC41 C H sing 1.09 N N
60 C4 HC42 C H sing 1.09 N N
61 O4A HOA4 O H sing 0.97 N N
62 C5 C6 C C sing 1.53 N N
63 C5 HC51 C H sing 1.09 N N
64 C6 C7 C C sing 1.53 N N
65 C6 HC61 C H sing 1.09 N N
66 C6 HC62 C H sing 1.09 N N
67 C7 C8 C C sing 1.53 N N
68 C7 HC71 C H sing 1.09 N N
69 C8 C9 C C sing 1.54 N N
70 C8 HC81 C H sing 1.09 N N
71 C9 HC91 C H sing 1.09 N N