Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : I41    

Bonds between two atoms of the molecule

Total Number of Bonds: 50


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O04 C03 O C doub 1.21 N N
2 C03 O02 C O sing 1.34 N N
3 C03 C05 C C sing 1.51 N N
4 O02 C01 O C sing 1.45 N N
5 C05 C06 C C sing 1.53 N N
6 C05 N12 C N sing 1.47 N N
7 C06 C07 C C sing 1.51 N N
8 C07 C08 C C doub 1.35 N Y
9 C07 N11 C N sing 1.37 N Y
10 C08 N09 C N sing 1.34 N Y
11 N09 C10 N C doub 1.3 N Y
12 C10 N11 C N sing 1.35 N Y
13 N12 C13 N C sing 1.35 N N
14 C13 O14 C O doub 1.21 N N
15 C13 C15 C C sing 1.51 N N
16 C15 N16 C N sing 1.47 N N
17 N16 C17 N C sing 1.47 N N
18 N16 C21 N C sing 1.47 N N
19 C17 C18 C C sing 1.51 N N
20 C18 O19 C O sing 1.34 N N
21 C18 O20 C O doub 1.21 N N
22 C21 C22 C C sing 1.51 N N
23 C22 C23 C C sing 1.38 N Y
24 C22 C27 C C doub 1.38 N Y
25 C23 C24 C C doub 1.38 N Y
26 C24 C25 C C sing 1.38 N Y
27 C25 C26 C C doub 1.38 N Y
28 C26 C27 C C sing 1.38 N Y
29 C05 H05 C H sing 1.09 N N
30 C01 H011 C H sing 1.09 N N
31 C01 H012 C H sing 1.09 N N
32 C01 H013 C H sing 1.09 N N
33 C06 H061 C H sing 1.09 N N
34 C06 H062 C H sing 1.09 N N
35 N12 H12 N H sing 0.97 N N
36 C08 H08 C H sing 1.08 N N
37 N11 H11 N H sing 0.97 N N
38 C10 H10 C H sing 1.08 N N
39 C15 H151 C H sing 1.09 N N
40 C15 H152 C H sing 1.09 N N
41 C17 H171 C H sing 1.09 N N
42 C17 H172 C H sing 1.09 N N
43 C21 H211 C H sing 1.09 N N
44 C21 H212 C H sing 1.09 N N
45 O19 H19 O H sing 0.97 N N
46 C23 H23 C H sing 1.08 N N
47 C27 H27 C H sing 1.08 N N
48 C24 H24 C H sing 1.08 N N
49 C25 H25 C H sing 1.08 N N
50 C26 H26 C H sing 1.08 N N