Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GTA    

Bonds between two atoms of the molecule

Total Number of Bonds: 86


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N2 C2 N C sing 1.37 N N
2 N2 HN21 N H sing 0.97 N N
3 N2 HN22 N H sing 0.97 N N
4 O6 C6 O C doub 1.22 N N
5 C6 C5 C C sing 1.41 N N
6 C6 N1 C N sing 1.35 N N
7 C5 N7 C N sing 1.35 N Y
8 C5 C4 C C doub 1.4 N Y
9 N7 C7 N C sing 1.47 N N
10 N7 C8 N C doub 1.3 N Y
11 C7 H71 C H sing 1.09 N N
12 C7 H72 C H sing 1.09 N N
13 C7 H73 C H sing 1.09 N N
14 C8 N9 C N sing 1.36 N Y
15 C8 H8 C H sing 1.08 N N
16 N9 C4 N C sing 1.37 N Y
17 N9 C1A N C sing 1.46 N N
18 C4 N3 C N sing 1.34 N N
19 N3 C2 N C doub 1.31 N N
20 C2 N1 C N sing 1.36 N N
21 N1 HN1 N H sing 0.97 N N
22 O3A C3A O C sing 1.43 N N
23 O3A HO3A O H sing 0.97 N N
24 C1A C2A C C sing 1.54 N N
25 C1A O4A C O sing 1.44 N N
26 C1A H1A C H sing 1.09 N N
27 C2A C3A C C sing 1.55 N N
28 C2A O2A C O sing 1.43 N N
29 C2A H2A C H sing 1.09 N N
30 C3A C4A C C sing 1.55 N N
31 C3A H3A C H sing 1.09 N N
32 C4A C5A C C sing 1.53 N N
33 C4A O4A C O sing 1.45 N N
34 C4A H4A C H sing 1.09 N N
35 C5A O15 C O sing 1.43 N N
36 C5A H5A1 C H sing 1.09 N N
37 C5A H5A2 C H sing 1.09 N N
38 O2A HO2A O H sing 0.97 N N
39 P1 O11 P O doub 1.48 N N
40 P1 O12 P O sing 1.61 N N
41 P1 O13 P O sing 1.61 N N
42 P1 O15 P O sing 1.61 N N
43 O12 H122 O H sing 0.97 N N
44 O13 P2 O P sing 1.61 N N
45 P2 O22 P O sing 1.61 N N
46 P2 O21 P O doub 1.48 N N
47 P2 O23 P O sing 1.61 N N
48 O22 H222 O H sing 0.97 N N
49 O23 P3 O P sing 1.61 N N
50 P3 O32 P O sing 1.61 N N
51 P3 O31 P O doub 1.48 N N
52 P3 O33 P O sing 1.61 N N
53 O32 H322 O H sing 0.97 N N
54 O33 C5B O C sing 1.43 N N
55 C5B C4B C C sing 1.53 N N
56 C5B H5B1 C H sing 1.09 N N
57 C5B H5B2 C H sing 1.09 N N
58 C4B O4B C O sing 1.44 N N
59 C4B C3B C C sing 1.54 N N
60 C4B H4B C H sing 1.09 N N
61 O4B C1B O C sing 1.44 N N
62 C3B O3B C O sing 1.43 N N
63 C3B C2B C C sing 1.55 N N
64 C3B H3B C H sing 1.09 N N
65 O3B HO3B O H sing 0.97 N N
66 C2B O2B C O sing 1.43 N N
67 C2B C1B C C sing 1.55 N N
68 C2B H2B C H sing 1.09 N N
69 O2B HO2B O H sing 0.97 N N
70 C1B N9C C N sing 1.47 N N
71 C1B H1B C H sing 1.09 N N
72 N9C C8C N C sing 1.36 N Y
73 N9C C4C N C sing 1.37 N Y
74 C8C N7C C N doub 1.3 N Y
75 C8C H8C C H sing 1.08 N N
76 N7C C5C N C sing 1.35 N Y
77 C5C C6C C C doub 1.41 N Y
78 C5C C4C C C sing 1.4 N Y
79 C6C N6C C N sing 1.38 N N
80 C6C N1C C N sing 1.33 N Y
81 N6C HN61 N H sing 0.97 N N
82 N6C HN62 N H sing 0.97 N N
83 N1C C2C N C doub 1.32 N Y
84 C2C N3C C N sing 1.32 N Y
85 C2C H2C C H sing 1.08 N N
86 N3C C4C N C doub 1.33 N Y