Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GN1    

Bonds between two atoms of the molecule

Total Number of Bonds: 35


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 O1 C O sing 1.43 N N
2 C1 O5 C O sing 1.43 N N
3 C1 C2 C C sing 1.53 N N
4 C1 H1 C H sing 1.1 N N
5 OP1 P O P sing 1.62 N N
6 OP1 HOP1 O H sing 0.98 N N
7 P OP3 P O doub 1.5 N N
8 P OP2 P O sing 1.62 N N
9 P O1 P O sing 1.61 N N
10 OP2 HOP2 O H sing 0.98 N N
11 C2 C3 C C sing 1.53 N N
12 C2 N2 C N sing 1.44 N N
13 C2 H2 C H sing 1.1 N N
14 C3 C4 C C sing 1.53 N N
15 C3 O3 C O sing 1.43 N N
16 C3 H3 C H sing 1.1 N N
17 C4 C5 C C sing 1.53 N N
18 C4 O4 C O sing 1.43 N N
19 C4 H4 C H sing 1.1 N N
20 C5 C6 C C sing 1.53 N N
21 C5 O5 C O sing 1.43 N N
22 C5 H5 C H sing 1.1 N N
23 C6 O6 C O sing 1.41 N N
24 C6 H61 C H sing 1.09 N N
25 C6 H62 C H sing 1.09 N N
26 C8 C7 C C sing 1.49 N N
27 C8 H81 C H sing 1.1 N N
28 C8 H82 C H sing 1.1 N N
29 C8 H83 C H sing 1.1 N N
30 O3 HO3 O H sing 0.97 N N
31 O4 HO4 O H sing 0.97 N N
32 N2 C7 N C sing 1.38 N N
33 N2 HN2 N H sing 1.02 N N
34 C7 O7 C O doub 1.23 N N
35 O6 HO6 O H sing 0.97 N N