Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : FHG    

Bonds between two atoms of the molecule

Total Number of Bonds: 51


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N2 C2 N C sing 1.37 N N
2 C2 N1 C N sing 1.36 N N
3 C2 N3 C N doub 1.31 N N
4 N1 C6 N C sing 1.35 N N
5 N3 C4 N C sing 1.34 N N
6 C6 O6 C O doub 1.22 N N
7 C6 C5 C C sing 1.41 N N
8 C4 C5 C C doub 1.4 N Y
9 C4 N9 C N sing 1.37 N Y
10 C2' C1' C C sing 1.54 N N
11 C2' C3' C C sing 1.55 N N
12 C5 N7 C N sing 1.36 N Y
13 C1' N9 C N sing 1.47 N N
14 C1' O4' C O sing 1.44 N N
15 N9 C8 N C sing 1.36 N Y
16 O3' C3' O C sing 1.43 N N
17 C3' C4' C C sing 1.55 N N
18 N7 C8 N C doub 1.3 N Y
19 O4' C4' O C sing 1.44 N N
20 C4' C5' C C sing 1.53 N N
21 O1B P2 O P doub 1.48 N N
22 C5' O5' C O sing 1.43 N N
23 O5' P1 O P sing 1.61 N N
24 P2 O3A P O sing 1.61 N N
25 P2 O2B P O sing 1.61 N N
26 P2 C3B P C sing 1.82 N N
27 O3A P1 O P sing 1.61 N N
28 C3B F2B C F sing 1.4 N N
29 C3B P3 C P sing 1.82 N N
30 P1 O2A P O doub 1.48 N N
31 P1 O1A P O sing 1.61 N N
32 O3G P3 O P doub 1.48 N N
33 P3 O1G P O sing 1.61 N N
34 P3 O2G P O sing 1.61 N N
35 O1A H1 O H sing 0.97 N N
36 O2B H2 O H sing 0.97 N N
37 C3B H3 C H sing 1.09 N N
38 O1G H4 O H sing 0.97 N N
39 O2G H5 O H sing 0.97 N N
40 C5' H6 C H sing 1.09 N N
41 C5' H7 C H sing 1.09 N N
42 C4' H8 C H sing 1.09 N N
43 C1' H9 C H sing 1.09 N N
44 N2 H10 N H sing 0.97 N N
45 N2 H11 N H sing 0.97 N N
46 N1 H12 N H sing 0.97 N N
47 C8 H13 C H sing 1.08 N N
48 C2' H14 C H sing 1.09 N N
49 C2' H15 C H sing 1.09 N N
50 C3' H16 C H sing 1.09 N N
51 O3' H17 O H sing 0.97 N N