Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : DEB    

Bonds between two atoms of the molecule

Total Number of Bonds: 65


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.51 N N
2 C1 O16 C O sing 1.41 N N
3 C1 O17 C O doub 1.2 N N
4 C2 C3 C C sing 1.51 N N
5 C2 C18 C C sing 1.5 N N
6 C2 H2 C H sing 1.11 N N
7 C3 C4 C C sing 1.57 N N
8 C3 O19 C O sing 1.43 N N
9 C3 H3 C H sing 1.1 N N
10 C4 C5 C C sing 1.46 N N
11 C4 C20 C C sing 1.6 N N
12 C4 H4 C H sing 1.1 N N
13 C5 C6 C C sing 1.56 N N
14 C5 O21 C O sing 1.41 N N
15 C5 H5 C H sing 1.06 N N
16 C6 C7 C C sing 1.56 N N
17 C6 C22 C C sing 1.53 N N
18 C6 H6 C H sing 1.07 N N
19 C7 C8 C C sing 1.58 N N
20 C7 H71 C H sing 1.12 N N
21 C7 H72 C H sing 1.07 N N
22 C8 C9 C C sing 1.5 N N
23 C8 C23 C C sing 1.57 N N
24 C8 H8 C H sing 1.12 N N
25 C9 C10 C C sing 1.54 N N
26 C9 O24 C O doub 1.19 N N
27 C10 C11 C C sing 1.54 N N
28 C10 C25 C C sing 1.49 N N
29 C10 H10 C H sing 1.06 N N
30 C11 C12 C C sing 1.52 N N
31 C11 O26 C O sing 1.47 N N
32 C11 H11 C H sing 1.17 N N
33 C12 C13 C C sing 1.57 N N
34 C12 C27 C C sing 1.49 N N
35 C12 H12 C H sing 1.04 N N
36 C13 C14 C C sing 1.56 N N
37 C13 O16 C O sing 1.38 N N
38 C13 H13 C H sing 1.13 N N
39 C14 C15 C C sing 1.53 N N
40 C14 H141 C H sing 1.09 N N
41 C14 H142 C H sing 1.09 N N
42 C15 H151 C H sing 1.09 N N
43 C15 H152 C H sing 1.09 N N
44 C15 H153 C H sing 1.09 N N
45 C18 H181 C H sing 1.09 N N
46 C18 H182 C H sing 1.09 N N
47 C18 H183 C H sing 1.09 N N
48 O19 HO9 O H sing 0.97 N N
49 C20 H201 C H sing 1.09 N N
50 C20 H202 C H sing 1.09 N N
51 C20 H203 C H sing 1.09 N N
52 O21 HO1 O H sing 0.97 N N
53 C22 H221 C H sing 1.09 N N
54 C22 H222 C H sing 1.09 N N
55 C22 H223 C H sing 1.09 N N
56 C23 H231 C H sing 1.09 N N
57 C23 H232 C H sing 1.09 N N
58 C23 H233 C H sing 1.09 N N
59 C25 H251 C H sing 1.09 N N
60 C25 H252 C H sing 1.09 N N
61 C25 H253 C H sing 1.09 N N
62 O26 HO6 O H sing 0.97 N N
63 C27 H271 C H sing 1.09 N N
64 C27 H272 C H sing 1.09 N N
65 C27 H273 C H sing 1.09 N N