Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : CLK    

Bonds between two atoms of the molecule

Total Number of Bonds: 32


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 CL1A C CL sing 1.8 N N
2 C1 CL1B C CL sing 1.8 N N
3 C1 C2 C C sing 1.51 N N
4 C1 H1 C H sing 1.09 N N
5 C2 O2 C O doub 1.21 N N
6 C2 N2 C N sing 1.35 N N
7 N2 C3 N C sing 1.47 N N
8 N2 H2 N H sing 0.97 N N
9 C3 C4 C C sing 1.53 N N
10 C3 C5 C C sing 1.53 N N
11 C3 H3 C H sing 1.09 N N
12 C4 O4 C O sing 1.43 N N
13 C4 H4C1 C H sing 1.09 N N
14 C4 H4C2 C H sing 1.09 N N
15 O4 H4 O H sing 0.97 N N
16 C5 O5 C O sing 1.43 N N
17 C5 C6 C C sing 1.51 N N
18 C5 H5 C H sing 1.09 N N
19 O5 HA O H sing 0.97 N N
20 C6 C7 C C doub 1.38 N Y
21 C6 C11 C C sing 1.38 N Y
22 C7 C8 C C sing 1.38 N Y
23 C7 H7 C H sing 1.08 N N
24 C8 C9 C C doub 1.39 N Y
25 C8 H8 C H sing 1.08 N N
26 C9 N9 C N sing 1.4 N N
27 C9 C10 C C sing 1.39 N Y
28 N9 H9N1 N H sing 0.97 N N
29 N9 H9N2 N H sing 0.97 N N
30 C10 C11 C C doub 1.38 N Y
31 C10 H10 C H sing 1.08 N N
32 C11 H11 C H sing 1.08 N N