Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : CLA    

Bonds between two atoms of the molecule

Total Number of Bonds: 145


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 MG NA MG N sing 1.9 N N
2 MG NB MG N sing 1.9 N N
3 MG NC MG N sing 1.9 N N
4 MG ND MG N sing 1.9 N N
5 CHA C1A C C sing 1.4 N N
6 CHA C4D C C doub 1.41 N N
7 CHA CBD C C sing 1.5 N N
8 CHB C4A C C doub 1.39 N N
9 CHB C1B C C sing 1.4 N N
10 CHB HHB C H sing 1.08 N N
11 CHC C4B C C sing 1.39 N N
12 CHC C1C C C doub 1.42 N N
13 CHC HHC C H sing 1.08 N N
14 CHD C4C C C sing 1.42 N N
15 CHD C1D C C doub 1.4 N N
16 CHD HHD C H sing 1.08 N N
17 NA C1A N C doub 1.34 N N
18 NA C4A N C sing 1.34 N N
19 C1A C2A C C sing 1.51 N N
20 C2A C3A C C sing 1.56 N N
21 C2A CAA C C sing 1.53 N N
22 C2A H2A C H sing 1.09 N N
23 C3A C4A C C sing 1.51 N N
24 C3A CMA C C sing 1.53 N N
25 C3A H3A C H sing 1.09 N N
26 CMA HMA1 C H sing 1.09 N N
27 CMA HMA2 C H sing 1.09 N N
28 CMA HMA3 C H sing 1.09 N N
29 CAA CBA C C sing 1.53 N N
30 CAA HAA1 C H sing 1.09 N N
31 CAA HAA2 C H sing 1.09 N N
32 CBA CGA C C sing 1.51 N N
33 CBA HBA1 C H sing 1.09 N N
34 CBA HBA2 C H sing 1.09 N N
35 CGA O1A C O doub 1.21 N N
36 CGA O2A C O sing 1.34 N N
37 O2A C1 O C sing 1.45 N N
38 NB C1B N C sing 1.38 N Y
39 NB C4B N C sing 1.38 N Y
40 C1B C2B C C doub 1.38 N Y
41 C2B C3B C C sing 1.41 N Y
42 C2B CMB C C sing 1.51 N N
43 C3B C4B C C doub 1.41 N Y
44 C3B CAB C C sing 1.47 N N
45 CMB HMB1 C H sing 1.09 N N
46 CMB HMB2 C H sing 1.09 N N
47 CMB HMB3 C H sing 1.09 N N
48 CAB CBB C C doub 1.33 N N
49 CAB HAB C H sing 1.08 N N
50 CBB HBB1 C H sing 1.08 N N
51 CBB HBB2 C H sing 1.08 N N
52 NC C1C N C sing 1.34 N N
53 NC C4C N C doub 1.35 N N
54 C1C C2C C C sing 1.41 N N
55 C2C C3C C C doub 1.38 N N
56 C2C CMC C C sing 1.51 N N
57 C3C C4C C C sing 1.41 N N
58 C3C CAC C C sing 1.51 N N
59 CMC HMC1 C H sing 1.09 N N
60 CMC HMC2 C H sing 1.09 N N
61 CMC HMC3 C H sing 1.09 N N
62 CAC CBC C C sing 1.53 N N
63 CAC HAC1 C H sing 1.09 N N
64 CAC HAC2 C H sing 1.09 N N
65 CBC HBC1 C H sing 1.09 N N
66 CBC HBC2 C H sing 1.09 N N
67 CBC HBC3 C H sing 1.09 N N
68 ND C1D N C sing 1.37 N N
69 ND C4D N C sing 1.35 N N
70 C1D C2D C C sing 1.39 N N
71 C2D C3D C C doub 1.41 N N
72 C2D CMD C C sing 1.51 N N
73 C3D C4D C C sing 1.39 N N
74 C3D CAD C C sing 1.46 N N
75 CMD HMD1 C H sing 1.09 N N
76 CMD HMD2 C H sing 1.09 N N
77 CMD HMD3 C H sing 1.09 N N
78 CAD OBD C O doub 1.21 N N
79 CAD CBD C C sing 1.53 N N
80 CBD CGD C C sing 1.51 N N
81 CBD HBD C H sing 1.09 N N
82 CGD O1D C O doub 1.21 N N
83 CGD O2D C O sing 1.34 N N
84 O2D CED O C sing 1.45 N N
85 CED HED1 C H sing 1.09 N N
86 CED HED2 C H sing 1.09 N N
87 CED HED3 C H sing 1.09 N N
88 C1 C2 C C sing 1.51 N N
89 C1 H11 C H sing 1.09 N N
90 C1 H12 C H sing 1.09 N N
91 C2 C3 C C doub 1.31 E N
92 C2 H2 C H sing 1.08 N N
93 C3 C4 C C sing 1.51 N N
94 C3 C5 C C sing 1.51 N N
95 C4 H41 C H sing 1.09 N N
96 C4 H42 C H sing 1.09 N N
97 C4 H43 C H sing 1.09 N N
98 C5 C6 C C sing 1.53 N N
99 C5 H51 C H sing 1.09 N N
100 C5 H52 C H sing 1.09 N N
101 C6 C7 C C sing 1.53 N N
102 C6 H61 C H sing 1.09 N N
103 C6 H62 C H sing 1.09 N N
104 C7 C8 C C sing 1.53 N N
105 C7 H71 C H sing 1.09 N N
106 C7 H72 C H sing 1.09 N N
107 C8 C9 C C sing 1.53 N N
108 C8 C10 C C sing 1.53 N N
109 C8 H8 C H sing 1.09 N N
110 C9 H91 C H sing 1.09 N N
111 C9 H92 C H sing 1.09 N N
112 C9 H93 C H sing 1.09 N N
113 C10 C11 C C sing 1.53 N N
114 C10 H101 C H sing 1.09 N N
115 C10 H102 C H sing 1.09 N N
116 C11 C12 C C sing 1.53 N N
117 C11 H111 C H sing 1.09 N N
118 C11 H112 C H sing 1.09 N N
119 C12 C13 C C sing 1.53 N N
120 C12 H121 C H sing 1.09 N N
121 C12 H122 C H sing 1.09 N N
122 C13 C14 C C sing 1.53 N N
123 C13 C15 C C sing 1.53 N N
124 C13 H13 C H sing 1.09 N N
125 C14 H141 C H sing 1.09 N N
126 C14 H142 C H sing 1.09 N N
127 C14 H143 C H sing 1.09 N N
128 C15 C16 C C sing 1.53 N N
129 C15 H151 C H sing 1.09 N N
130 C15 H152 C H sing 1.09 N N
131 C16 C17 C C sing 1.53 N N
132 C16 H161 C H sing 1.09 N N
133 C16 H162 C H sing 1.09 N N
134 C17 C18 C C sing 1.53 N N
135 C17 H171 C H sing 1.09 N N
136 C17 H172 C H sing 1.09 N N
137 C18 C19 C C sing 1.53 N N
138 C18 C20 C C sing 1.53 N N
139 C18 H18 C H sing 1.09 N N
140 C19 H191 C H sing 1.09 N N
141 C19 H192 C H sing 1.09 N N
142 C19 H193 C H sing 1.09 N N
143 C20 H201 C H sing 1.09 N N
144 C20 H202 C H sing 1.09 N N
145 C20 H203 C H sing 1.09 N N