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PDBeChem : Chemical Bonds
Molecule :
C46
Bonds between two atoms of the molecule
Total Number of Bonds: 41
50
10 per page
20 per page
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Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
P
O1P
P
O
sing
1.61
N
N
2
P
O2P
P
O
doub
1.48
N
N
3
P
O3P
P
O
sing
1.61
N
N
4
P
O5'
P
O
sing
1.61
N
N
5
O1P
H1P
O
H
sing
0.97
N
N
6
O3P
H3P
O
H
sing
0.97
N
N
7
O5'
C5'
O
C
sing
1.43
N
N
8
C5'
C4'
C
C
sing
1.53
N
N
9
C5'
H5'1
C
H
sing
1.09
N
N
10
C5'
H5'2
C
H
sing
1.09
N
N
11
C4'
O4'
C
O
sing
1.45
N
N
12
C4'
C3'
C
C
sing
1.54
N
N
13
C4'
H4'
C
H
sing
1.09
N
N
14
O4'
C1'
O
C
sing
1.44
N
N
15
C3'
O3'
C
O
sing
1.43
N
N
16
C3'
C2'
C
C
sing
1.54
N
N
17
C3'
H3'
C
H
sing
1.09
N
N
18
O3'
HA
O
H
sing
0.97
N
N
19
C2'
C1'
C
C
sing
1.54
N
N
20
C2'
H2'1
C
H
sing
1.09
N
N
21
C2'
H2'2
C
H
sing
1.09
N
N
22
C1'
N1
C
N
sing
1.47
N
N
23
C1'
H1'
C
H
sing
1.09
N
N
24
N1
C2
N
C
sing
1.34
N
N
25
N1
C6
N
C
sing
1.36
N
N
26
C2
O2
C
O
doub
1.22
N
N
27
C2
N3
C
N
sing
1.33
N
N
28
N3
C4
N
C
doub
1.32
N
N
29
C4
N4
C
N
sing
1.38
N
N
30
C4
C5
C
C
sing
1.41
N
N
31
N4
O4
N
O
sing
1.42
N
N
32
N4
H4
N
H
sing
0.97
N
N
33
C5
C6
C
C
doub
1.35
N
N
34
C5
CM5
C
C
sing
1.51
N
N
35
C6
H6
C
H
sing
1.08
N
N
36
CM5
C7
C
C
sing
1.53
N
N
37
CM5
HM51
C
H
sing
1.09
N
N
38
CM5
HM52
C
H
sing
1.09
N
N
39
O4
C7
O
C
sing
1.43
N
N
40
C7
H7C1
C
H
sing
1.09
N
N
41
C7
H7C2
C
H
sing
1.09
N
N