Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : C2P    

Bonds between two atoms of the molecule

Total Number of Bonds: 36


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C2 N C sing 1.35 N N
2 N1 C6 N C sing 1.36 N N
3 N1 C1' N C sing 1.46 N N
4 C2 N3 C N sing 1.33 N N
5 C2 O2 C O doub 1.22 N N
6 N3 C4 N C doub 1.33 N N
7 C4 C5 C C sing 1.41 N N
8 C4 N4 C N sing 1.38 N N
9 C5 C6 C C doub 1.35 N N
10 C5 H5 C H sing 1.08 N N
11 C6 H6 C H sing 1.08 N N
12 N4 HN41 N H sing 0.97 N N
13 N4 HN42 N H sing 0.97 N N
14 C1' C2' C C sing 1.54 N N
15 C1' O4' C O sing 1.45 N N
16 C1' H1' C H sing 1.09 N N
17 C2' O2' C O sing 1.43 N N
18 C2' C3' C C sing 1.55 N N
19 C2' H2' C H sing 1.09 N N
20 O2' P O P sing 1.61 N N
21 C3' C4' C C sing 1.54 N N
22 C3' O3' C O sing 1.43 N N
23 C3' H3' C H sing 1.09 N N
24 C4' O4' C O sing 1.44 N N
25 C4' C5' C C sing 1.53 N N
26 C4' H4' C H sing 1.09 N N
27 O3' HO3' O H sing 0.97 N N
28 C5' O5' C O sing 1.43 N N
29 C5' H5'1 C H sing 1.09 N N
30 C5' H5'2 C H sing 1.09 N N
31 O5' HO5' O H sing 0.97 N N
32 P O1P P O doub 1.48 N N
33 P O2P P O sing 1.61 N N
34 P O3P P O sing 1.61 N N
35 O2P HOP2 O H sing 0.97 N N
36 O3P HOP3 O H sing 0.97 N N