Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : BZ1    

Bonds between two atoms of the molecule

Total Number of Bonds: 45


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C3 C4 C C sing 1.53 N N
2 C3 C2 C C sing 1.53 N N
3 C3 H31 C H sing 1.09 N N
4 C3 H32 C H sing 1.09 N N
5 C9 C10 C C doub 1.35 N Y
6 C9 C11 C C sing 1.52 N N
7 C9 C8 C C sing 1.39 N Y
8 C10 S2 C S sing 1.75 N Y
9 C10 S3 C S sing 1.77 N N
10 C11 C12 C C sing 1.52 N N
11 C11 N1 C N sing 1.47 N N
12 C11 H11 C H sing 1.09 N N
13 C12 N3 C N sing 1.47 N N
14 C12 H121 C H sing 1.09 N N
15 C12 H122 C H sing 1.09 N N
16 S1 N2 S N sing 1.66 N N
17 S1 O3 S O doub 1.42 N N
18 S1 O4 S O doub 1.42 N N
19 S1 C7 S C sing 1.76 N N
20 C4 O1 C O sing 1.43 N N
21 C4 H41 C H sing 1.09 N N
22 C4 H42 C H sing 1.09 N N
23 C5 C6 C C sing 1.53 N N
24 C5 H51 C H sing 1.09 N N
25 C5 H52 C H sing 1.09 N N
26 C5 H53 C H sing 1.09 N N
27 C6 N1 C N sing 1.47 N N
28 C6 H61 C H sing 1.09 N N
29 C6 H62 C H sing 1.09 N N
30 S2 C7 S C sing 1.76 N Y
31 N2 HN21 N H sing 0.97 N N
32 N2 HN22 N H sing 0.97 N N
33 C7 C8 C C doub 1.33 N Y
34 C8 H8 C H sing 1.08 N N
35 S3 O2 S O doub 1.42 N N
36 S3 O5 S O doub 1.42 N N
37 S3 N3 S N sing 1.67 N N
38 N3 C2 N C sing 1.47 N N
39 N1 HN1 N H sing 1.01 N N
40 C2 H21 C H sing 1.09 N N
41 C2 H22 C H sing 1.09 N N
42 O1 C1 O C sing 1.43 N N
43 C1 H11A C H sing 1.09 N N
44 C1 H12 C H sing 1.09 N N
45 C1 H13 C H sing 1.09 N N