Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : BIR    

Bonds between two atoms of the molecule

Total Number of Bonds: 57


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C3 C2 C C sing 1.53 N N
2 C3 H31 C H sing 1.09 N N
3 C3 H32 C H sing 1.09 N N
4 C3 H33 C H sing 1.09 N N
5 C2 N1 C N sing 1.47 N N
6 C2 P4 C P sing 1.82 N N
7 C2 H2 C H sing 1.09 N N
8 N1 HN11 N H sing 1.01 N N
9 N1 HN12 N H sing 1.01 N N
10 P4 O6 P O doub 1.48 N N
11 P4 O5 P O sing 1.61 N N
12 P4 C7 P C sing 1.82 N N
13 O5 HO5 O H sing 0.97 N N
14 C7 C8 C C sing 1.53 N N
15 C7 H71 C H sing 1.09 N N
16 C7 H72 C H sing 1.09 N N
17 C8 C10 C C sing 1.51 N N
18 C8 C9 C C sing 1.53 N N
19 C8 H8 C H sing 1.09 N N
20 C10 O23 C O doub 1.21 N N
21 C10 N24 C N sing 1.35 N N
22 N24 C25 N C sing 1.46 N N
23 N24 H24 N H sing 0.97 N N
24 C25 C26 C C sing 1.53 N N
25 C25 C27 C C sing 1.51 N N
26 C25 H25 C H sing 1.09 N N
27 C26 H261 C H sing 1.09 N N
28 C26 H262 C H sing 1.09 N N
29 C26 H263 C H sing 1.09 N N
30 C27 O28 C O sing 1.34 N N
31 C27 O29 C O doub 1.21 N N
32 O28 H28 O H sing 0.97 N N
33 C9 C11 C C sing 1.51 N N
34 C9 H91 C H sing 1.09 N N
35 C9 H92 C H sing 1.09 N N
36 C11 C12 C C doub 1.38 N Y
37 C11 C16 C C sing 1.38 N Y
38 C12 C13 C C sing 1.38 N Y
39 C12 H12 C H sing 1.08 N N
40 C13 C14 C C doub 1.39 N Y
41 C13 H13 C H sing 1.08 N N
42 C14 C15 C C sing 1.39 N Y
43 C14 C17 C C sing 1.48 N Y
44 C15 C16 C C doub 1.38 N Y
45 C15 H15 C H sing 1.08 N N
46 C16 H16 C H sing 1.08 N N
47 C17 C18 C C doub 1.39 N Y
48 C17 C22 C C sing 1.39 N Y
49 C18 C19 C C sing 1.38 N Y
50 C18 H18 C H sing 1.08 N N
51 C19 C20 C C doub 1.38 N Y
52 C19 H19 C H sing 1.08 N N
53 C20 C21 C C sing 1.38 N Y
54 C20 H20 C H sing 1.08 N N
55 C21 C22 C C doub 1.38 N Y
56 C21 H21 C H sing 1.08 N N
57 C22 H22 C H sing 1.08 N N